RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 DUPD1Q68J44 220 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 SAMD3Q8N6K7 520 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 CD101Q93033 1021 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 FMO2Q99518 471 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 NTPCRQ9BSD7 190 aaKnown RBP15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 ZDHHC18Q9NUE0 388 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 ZNF112Q9UJU3 913 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 TTC7AQ9ULT0 858 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 NOVA2Q9UNW9 492 aaKnown RBP15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 COQ4Q9Y3A0 265 aa15.11■□□□□ 0.01
PCDHGA3-202ENST00000612467 KIAA0391O15091 583 aaKnown RBP15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 MYZAPP0CAP1 466 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 GLRA2P23416 452 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 LSP1P33241 339 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 C11orf63Q6NUN7 778 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 EPB41L4BQ9H329 900 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 AS3MTQ9HBK9 375 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 APOBEC3GQ9HC16 384 aaKnown RBP15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 PPANQ9NQ55 473 aaKnown RBP15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 ARHGAP28Q9P2N2 729 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 ANAPC7Q9UJX3 599 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 SPATA31C2B4DYI2 1134 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 FZD9O00144 591 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 HLA-DRAP01903 254 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 SUPT20HL2P0C7V6 817 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 RPS12P25398 132 aaKnown RBP15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 MARK3P27448 753 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 GJC1P36383 396 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 TRIP13Q15645 432 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 SUPT20HL1Q3ZLR7 823 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 CCDC137Q6PK04 289 aaKnown RBP15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 CRELD2Q6UXH1 353 aaPredicted RBP15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 KDM7AQ6ZMT4 941 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 CD302Q8IX05 232 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 ANKRD35Q8N283 1001 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 UBL4BQ8N7F7 174 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 OR5B17Q8NGF7 314 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 SPIRE2Q8WWL2 714 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 SEC14L1Q92503 715 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 CYFIP2Q96F07 1278 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 DNAJC17Q9NVM6 304 aaKnown RBP15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 ADAMTS5Q9UNA0 930 aa15.1■□□□□ 0.01
PCDHGA3-202ENST00000612467 MAPK13O15264 365 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 VNN1O95497 513 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 FGFR4P22455 802 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 KRT71Q3SY84 523 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 TMEM63BQ5T3F8 832 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 CDR2LQ86X02 465 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 TRIM50Q86XT4 487 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 MDM1Q8TC05 714 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 LRRC45Q96CN5 670 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 IFT74Q96LB3 600 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 TIPINQ9BVW5 301 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 GRHL1Q9NZI5 618 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 BTBD7Q9P203 1132 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 FBXO40Q9UH90 709 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 GOLGA6L10A0A0M3HER8 536 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 TLDC2A0PJX2 215 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 NDUFAB1O14561 156 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 CYP1A2P05177 515 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 SIX1Q15475 284 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 PRUNE1Q86TP1 453 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 SLC16A10Q8TF71 515 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 TMEM174Q8WUU8 243 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 SENP7Q9BQF6 1050 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 ZNF302Q9NR11 478 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 SYNGAP1Q96PV0 1343 aa15.09■□□□□ 0.01
PCDHGA3-202ENST00000612467 PHF2O75151 1096 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 GZMAP12544 262 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 TNFSF9P41273 254 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 PIK3CAP42336 1068 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 MAGOHP61326 146 aaKnown RBP15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 SEL1L2Q5TEA6 688 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 ACAD10Q6JQN1 1059 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 ZBTB33Q86T24 672 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 IPO4Q8TEX9 1081 aaKnown RBP15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 RNF25Q96BH1 459 aaPredicted RBP15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 PCYT2Q99447 389 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 HEMGNQ9BXL5 484 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 SEMA4AQ9H3S1 761 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 KLHL11Q9NVR0 708 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 AGO2Q9UKV8 859 aaKnown RBP15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 MROH7Q68CQ1 1323 aa15.08■□□□□ 0.01
PCDHGA3-202ENST00000612467 GOLGA6L10A6NI86 522 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 CAND2O75155 1236 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 SLCO1A2P46721 670 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 HADHBP55084 474 aaKnown RBP15.08■□□□□ 0
PCDHGA3-202ENST00000612467 R3HDM1Q15032 1099 aaKnown RBP15.08■□□□□ 0
PCDHGA3-202ENST00000612467 CLEC16AQ2KHT3 1053 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 BRDTQ58F21 947 aaPredicted RBP15.08■□□□□ 0
PCDHGA3-202ENST00000612467 ODF2Q5BJF6 829 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 MIS18BP1Q6P0N0 1132 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 CCDC25Q86WR0 208 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 SLC13A5Q86YT5 568 aaPredicted RBP15.08■□□□□ 0
PCDHGA3-202ENST00000612467 CCDC105Q8IYK2 499 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 MCPH1Q8NEM0 835 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 TMC2Q8TDI7 906 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 FAM212AQ96EL1 285 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 PWWP2AQ96N64 755 aa15.08■□□□□ 0
PCDHGA3-202ENST00000612467 FNBP1Q96RU3 617 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms