RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PDCD11Q14690 1871 aaKnown RBP8.09□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SPAARA0A1B0GVQ0 90 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 BCLAF3A2AJT9 711 aaKnown RBP8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 DDX39AO00148 427 aaKnown RBP8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ARNTLO00327 626 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 DHX15O43143 795 aaKnown RBP8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 EXTL3O43909 919 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 XYLBO75191 536 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CDC45O75419 566 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CAVIN2O95810 425 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 TMOD1P28289 359 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 OR1G1P47890 313 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PXNP49023 591 aaPredicted RBP8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 LRRC32Q14392 662 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 USP41Q3LFD5 358 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PRSS55Q6UWB4 352 aaPredicted RBP8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 TRMT1LQ7Z2T5 733 aaKnown RBP8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CHCHD4Q8N4Q1 142 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZFRQ96KR1 1074 aaKnown RBP8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CLSTN3Q9BQT9 956 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 UBAC1Q9BSL1 405 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 DUSP15Q9H1R2 295 aaPredicted RBP8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PSTPIP2Q9H939 334 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RSAD1Q9HA92 442 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZFP14Q9HCL3 533 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 POLIQ9UNA4 740 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CEP131Q9UPN4 1083 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MRPS23Q9Y3D9 190 aaKnown RBP8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ABCA7Q8IZY2 2146 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 BPTFQ12830 3046 aa8.08□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CNTNAP2Q9UHC6 1331 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MEIS1O00470 390 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SGSM2O43147 1006 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 EPB41L2O43491 1005 aaKnown RBP8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CCDC192P0DO97 292 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PSMC3P17980 439 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 GDI1P31150 447 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CREB5Q02930 508 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 DRP2Q13474 957 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 UBE2SQ16763 222 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 FAM78AQ5JUQ0 283 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 DGKKQ5KSL6 1271 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 LIN9Q5TKA1 542 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MIS18BP1Q6P0N0 1132 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 FUT10Q6P4F1 479 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 VITQ6UXI7 678 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RAB44Q7Z6P3 723 aaPredicted RBP8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CKAP2LQ8IYA6 745 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 NLRP7Q8WX94 980 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 DDX12PQ92771 950 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 COLEC11Q9BWP8 271 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 GCOM2Q9BZD3 368 aaPredicted RBP8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SENP2Q9HC62 589 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 AVENQ9NQS1 362 aaPredicted RBP8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MIOSQ9NXC5 875 aa8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PIN4Q9Y237 131 aaKnown RBP8.07□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ATG2BQ96BY7 2078 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 A0A087WZ62 844 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 H0Y626 953 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ADAM12O43184 909 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZNF862O60290 1169 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 TRIM16O95361 564 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RHOP08100 348 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CEBPBP17676 345 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SFPQP23246 707 aaKnown RBP eCLIP8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 KIF5BP33176 963 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 IRX4P78413 519 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SIM1P81133 766 aaPredicted RBP8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CREMQ03060 361 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CCINQ13939 588 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 UVSSAQ2YD98 709 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 UAP1L1Q3KQV9 507 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CEP55Q53EZ4 464 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PRSS36Q5K4E3 855 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RTP2Q5QGT7 225 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 UBXN11Q5T124 520 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 TXNDC11Q6PKC3 985 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CYB5R4Q7L1T6 521 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PIP4P1Q86T03 277 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ZNF605Q86T29 641 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SLC7A14Q8TBB6 771 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CRELD1Q96HD1 420 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SCLT1Q96NL6 688 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ASB16Q96NS5 453 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 UBL7Q96S82 380 aaPredicted RBP8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 FDXACB1Q9BRP7 624 aaPredicted RBP8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ESYT1Q9BSJ8 1104 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 KRT23Q9C075 422 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 CCDC86Q9H6F5 360 aaKnown RBP8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 RAXQ9Y2V3 346 aa8.06□□□□□ -1.12
PTCHD3P1-201ENST00000612350 NCANO14594 1321 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 TDRD15B5MCY1 1934 aaKnown RBP8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MYO18BQ8IUG5 2567 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SPDYE3A6NKU9 549 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 PATE3B3GLJ2 98 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 KHNYNO15037 678 aaKnown RBP8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 MEFVO15553 781 aaPredicted RBP8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 ARHGAP6O43182 974 aa8.05□□□□□ -1.12
PTCHD3P1-201ENST00000612350 SOX9P48436 509 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms