RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 FAM182BQ5T319 152 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 ZNF571Q7Z3V5 609 aaPredicted RBP11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 SLC30A5Q8TAD4 765 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 ZNF507Q8TCN5 953 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 MOV10L1Q9BXT6 1211 aaKnown RBP11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 SLC24A3Q9HC58 644 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 TMEM8AQ9HCN3 771 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 PCDHA10Q9Y5I2 948 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 CACNA1FO60840 1977 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 RAD17O75943 681 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 RARGP13631 454 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 MUTP22033 750 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 GPC3P51654 580 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 PSMC1P62191 440 aaKnown RBP11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 MAPK6Q16659 721 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 CDO1Q16878 200 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 HP1BP3Q5SSJ5 553 aaPredicted RBP11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 INTS5Q6P9B9 1019 aaKnown RBP11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 GADL1Q6ZQY3 521 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 RIT2Q99578 217 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 DRC3Q9H069 523 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 AGPAT3Q9NRZ7 376 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 KPNA7A9QM74 516 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 SMAPO00193 183 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 SRGAP2CP0DJJ0 459 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 GHRP10912 638 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 CCDC117Q8IWD4 279 aaPredicted RBP11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 SCFD1Q8WVM8 642 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 ERP27Q96DN0 273 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 C9orf72Q96LT7 481 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 SUFUQ9UMX1 484 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 IGF2BP3O00425 579 aaKnown RBP eCLIP11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 ASAP2O43150 1006 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 PFDN1O60925 122 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 KYNUQ16719 465 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 LRRC23Q53EV4 343 aaPredicted RBP11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 NUDCD3Q8IVD9 361 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 SPATA20Q8TB22 786 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 OLFM3Q96PB7 478 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 RIOX1Q9H6W3 641 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 CD248Q9HCU0 757 aa11.56□□□□□ -0.56
CDC42EP3-206ENST00000611976 DCCP43146 1447 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 MED24O75448 989 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 KLRK1P26718 216 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 MAGEA4P43358 317 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 TNFAIP2Q03169 654 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 GIT2Q14161 759 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 LONP2Q86WA8 852 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 RHPN2Q8IUC4 686 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 TMEM139Q8IV31 216 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SUGP1Q8IWZ8 645 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 TTC39CQ8N584 583 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 LINC00116Q8NCU8 138 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 PPWD1Q96BP3 646 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 OSBPL8Q9BZF1 889 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 TMEM117Q9H0C3 514 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 ZNF302Q9NR11 478 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 PCDHB2Q9Y5E7 798 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 O00370 1275 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SYF2O95926 243 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 GABPAQ06546 454 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 STXBP2Q15833 593 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 TAF12Q16514 161 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SPOPLQ6IQ16 392 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 CDC42EP5Q6NZY7 148 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 RAB44Q7Z6P3 723 aaPredicted RBP11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 CDKL3Q8IVW4 592 aaPredicted RBP11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 HDAC7Q8WUI4 952 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 WHRNQ9P202 907 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 PFDN6O15212 129 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SLC10A5Q5PT55 438 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SWSAP1Q6NVH7 229 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SESTD1Q86VW0 696 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 THNSL1Q8IYQ7 743 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SDCCAG3Q96C92 435 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 C2orf40Q9H1Z8 148 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 RANBP17Q9H2T7 1088 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 PRR12Q9ULL5 1215 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 RIC1Q4ADV7 1423 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 F8VZ95 297 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 TFRCP02786 760 aaKnown RBP11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 PBX1P40424 430 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 PTENP60484 403 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 SPDYCQ5MJ68 293 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 RUSC1Q9BVN2 902 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 TSSK1BQ9BXA7 367 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 RNF146Q9NTX7 359 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 TRIM33Q9UPN9 1127 aa11.55□□□□□ -0.56
CDC42EP3-206ENST00000611976 KNDC1Q76NI1 1749 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 SRRM3A6NNA2 597 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 MSH4O15457 936 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 DGAT1O75907 488 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 IRX1P78414 480 aaPredicted RBP11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 TMEM119Q4V9L6 283 aa11.54□□□□□ -0.56
CDC42EP3-206ENST00000611976 TAF1BQ53T94 588 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms