RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 ARRDC4Q8NCT1 418 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 NEK11Q8NG66 645 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 CCDC127Q96BQ5 260 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 MFSD14AQ96MC6 490 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 POP1Q99575 1024 aaKnown RBP8.79□□□□□ -1
TARDBP-213ENST00000611963 OSMRQ99650 979 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 TCHPQ9BT92 498 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 NFKBIZQ9BYH8 718 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 GANQ9H2C0 597 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 AGPAT5Q9NUQ2 364 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 PRMT7Q9NVM4 692 aaPredicted RBP8.79□□□□□ -1
TARDBP-213ENST00000611963 GCNT4Q9P109 453 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 GTF2IRD1Q9UHL9 959 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 GRIN2DO15399 1336 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 CNTNAP2Q9UHC6 1331 aa8.79□□□□□ -1
TARDBP-213ENST00000611963 LAMA3Q16787 3333 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 ZNF233A6NK53 670 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 LRRIQ3A6PVS8 624 aaPredicted RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 CLDN3O15551 220 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 TOM1L1O75674 476 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 DLATP10515 647 aaKnown RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 ARF4P18085 180 aaPredicted RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 PROZP22891 400 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 PON1P27169 355 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 TNFSF9P41273 254 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 MCL1Q07820 350 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 SNX17Q15036 470 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 LMBRD2Q68DH5 695 aaPredicted RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 DPY19L2P1Q6NXN4 242 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 MPZL3Q6UWV2 235 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 SLC39A5Q6ZMH5 540 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 GBP6Q6ZN66 633 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 TSHZ1Q6ZSZ6 1077 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 SRGAP1Q7Z6B7 1085 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 RNF180Q86T96 592 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 TMEM139Q8IV31 216 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 CNGA4Q8IV77 575 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 PCSK9Q8NBP7 692 aaKnown RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 PARD3BQ8TEW8 1205 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 WNT8BQ93098 351 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 RNF166Q96A37 237 aaPredicted RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 VTI1AQ96AJ9 217 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 PANX2Q96RD6 677 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 NUP58Q9BVL2 599 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 GCOM2Q9BZD3 368 aaPredicted RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 INTS2Q9H0H0 1204 aaKnown RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 CDT1Q9H211 546 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 TMX1Q9H3N1 280 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 PDZD7Q9H5P4 517 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 PDE11AQ9HCR9 933 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 PTPRHQ9HD43 1115 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 SIX2Q9NPC8 291 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 NLRC4Q9NPP4 1024 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.78□□□□□ -11e-9■■■■□ 21.2
TARDBP-213ENST00000611963 ABHD10Q9NUJ1 306 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 RBAKQ9NYW8 714 aaPredicted RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 AJAP1Q9UKB5 411 aaPredicted RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 CAPN11Q9UMQ6 739 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 LUC7L2Q9Y383 392 aaKnown RBP8.78□□□□□ -1
TARDBP-213ENST00000611963 FHOD1Q9Y613 1164 aa8.78□□□□□ -1
TARDBP-213ENST00000611963 A0A1W2PQJ5 194 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 GTPBP10A4D1E9 387 aaKnown RBP8.77□□□□□ -1.01
TARDBP-213ENST00000611963 SOWAHDA6NJG2 315 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 KBTBD13C9JR72 458 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 KIAA0391O15091 583 aaKnown RBP8.77□□□□□ -1.01
TARDBP-213ENST00000611963 OGTO15294 1046 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 FAM189A1O60320 539 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 TSPAN1O60635 241 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 N4BP1O75113 896 aaKnown RBP8.77□□□□□ -1.01
TARDBP-213ENST00000611963 ERLIN2O94905 339 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 CTSHP09668 335 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 DARSP14868 501 aaKnown RBP8.77□□□□□ -1.01
TARDBP-213ENST00000611963 MSNP26038 577 aaKnown RBP8.77□□□□□ -1.01
TARDBP-213ENST00000611963 BMP8BP34820 402 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 MAGEA10P43363 369 aaPredicted RBP8.77□□□□□ -1.01
TARDBP-213ENST00000611963 MXI1P50539 228 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 ACLYP53396 1101 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 POLR2FP61218 127 aaKnown RBP8.77□□□□□ -1.01
TARDBP-213ENST00000611963 OSTNP61366 133 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 ZBED6P86452 979 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 ITGA7Q13683 1181 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 PSMD6Q15008 389 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 FIGNQ5HY92 759 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 KLHDC7AQ5VTJ3 777 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 E4F1Q66K89 784 aaPredicted RBP8.77□□□□□ -1.01
TARDBP-213ENST00000611963 PDXDC1Q6P996 788 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 GJB7Q6PEY0 223 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 CATSPER4Q7RTX7 472 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 BRSK2Q8IWQ3 736 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 TMEM192Q8IY95 271 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 THNSL1Q8IYQ7 743 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 CEP120Q8N960 986 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 CCDC112Q8NEF3 446 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 OR8K1Q8NGG5 319 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 BAP1Q92560 729 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 ELMO3Q96BJ8 720 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 CCDC51Q96ER9 411 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 DNAJC7Q99615 494 aa8.77□□□□□ -1.01
TARDBP-213ENST00000611963 BAG1Q99933 345 aaPredicted RBP8.77□□□□□ -1.01
TARDBP-213ENST00000611963 TMEM117Q9H0C3 514 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms