RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 STRIP2Q9ULQ0 834 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 WDR91A4D1P6 747 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 VWA5AO00534 786 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 EXTL3O43909 919 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 PGK2P07205 417 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 CYP2C19P33261 490 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 ARL4AP40617 200 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 ATP11AP98196 1134 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 FAM102AQ5T9C2 384 aaPredicted RBP13.99□□□□□ -0.17
TCF3-220ENST00000611869 NUGGCQ68CJ6 796 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 TATDN1Q6P1N9 297 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 SRRM1Q8IYB3 904 aaKnown RBP13.99□□□□□ -0.17
TCF3-220ENST00000611869 MCUR1Q96AQ8 359 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 TLR10Q9BXR5 811 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 FGFBP2Q9BYJ0 223 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 PARVAQ9NVD7 372 aa13.99□□□□□ -0.17
TCF3-220ENST00000611869 ASB14A6NK59 587 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 KIAA0391O15091 583 aaKnown RBP13.98□□□□□ -0.17
TCF3-220ENST00000611869 CYP3A4P08684 503 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 TGFB2P61812 414 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 GPS1Q13098 491 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 MXD4Q14582 209 aaPredicted RBP13.98□□□□□ -0.17
TCF3-220ENST00000611869 ARHGEF18Q6ZSZ5 1173 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 HDAC7Q8WUI4 952 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 DHX38Q92620 1227 aaKnown RBP13.98□□□□□ -0.17
TCF3-220ENST00000611869 ATP2A3Q93084 1043 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 RANBP17Q9H2T7 1088 aaKnown RBP13.98□□□□□ -0.17
TCF3-220ENST00000611869 SPON1Q9HCB6 807 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 MYL3P08590 195 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 PRLRP16471 622 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 PPP2R2AP63151 447 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 KCNMA1Q12791 1236 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 CCDC62Q6P9F0 684 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 C1orf186Q6ZWK4 172 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 JAMLQ86YT9 394 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 ETNPPLQ8TBG4 499 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 KIF12Q96FN5 646 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.98□□□□□ -0.17
TCF3-220ENST00000611869 INTUQ9ULD6 942 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 FRMPD4Q14CM0 1322 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 C5P01031 1676 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 CYP3A7-CYP3A51PA0A087WV96 503 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 ZSCAN5CA6NGD5 496 aaPredicted RBP13.98□□□□□ -0.17
TCF3-220ENST00000611869 PSMD10O75832 226 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 SPATA31C1P0DKV0 1188 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 SAT1P21673 171 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 CYP3A7P24462 503 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 TWF2Q6IBS0 349 aaKnown RBP13.98□□□□□ -0.17
TCF3-220ENST00000611869 ELAC2Q9BQ52 826 aaKnown RBP13.98□□□□□ -0.17
TCF3-220ENST00000611869 C17orf75Q9HAS0 396 aa13.98□□□□□ -0.17
TCF3-220ENST00000611869 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.98□□□□□ -0.17
TCF3-220ENST00000611869 MYO1CO00159 1063 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 HVCN1Q96D96 273 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 SHISA4Q96DD7 197 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 THOC1Q96FV9 657 aaKnown RBP13.97□□□□□ -0.17
TCF3-220ENST00000611869 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 AGAP1Q9UPQ3 857 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 PHF2O75151 1096 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 SNRPFP62306 86 aaKnown RBP13.97□□□□□ -0.17
TCF3-220ENST00000611869 TMEM62Q0P6H9 643 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 SLC35G1Q2M3R5 365 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 CBWD6Q4V339 395 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 CBWD3Q5JTY5 395 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 CBWD5Q5RIA9 395 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 KCNV1Q6PIU1 500 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 SV2AQ7L0J3 742 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 RSPH3Q86UC2 560 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 VPS52Q8N1B4 723 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 SIX6OS1Q8N1H7 587 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 C2orf69Q8N8R5 385 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 IL31RAQ8NI17 732 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 CASKIN2Q8WXE0 1202 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 CARD9Q9H257 536 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 H3BQF6 201 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 CPP00450 1065 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 SUPT20HL2P0C7V6 817 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 FKBP1CQ5VVH2 108 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 IZUMO3Q5VZ72 239 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 PDZD4Q76G19 769 aaPredicted RBP13.97□□□□□ -0.17
TCF3-220ENST00000611869 SH3BP5LQ7L8J4 393 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 IKZF4Q9H2S9 585 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 MAP3K20Q9NYL2 800 aaKnown RBP13.97□□□□□ -0.17
TCF3-220ENST00000611869 SPEF2Q9C093 1822 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 GTPBP10A4D1E9 387 aaKnown RBP13.97□□□□□ -0.17
TCF3-220ENST00000611869 SASH3O75995 380 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 KRT3P12035 628 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 RFC5P40937 340 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 AP3M2P53677 418 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 FAM133BQ5BKY9 247 aaKnown RBP13.97□□□□□ -0.17
TCF3-220ENST00000611869 SLC47A2Q86VL8 602 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 RUBCNQ92622 972 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 IFT122Q9HBG6 1241 aa13.97□□□□□ -0.17
TCF3-220ENST00000611869 RASA4BC9J798 803 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 RASA4O43374 803 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 LRRC14Q15048 493 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 EFCAB12Q6NXP0 572 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 STMN2Q93045 179 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 MCEEQ96PE7 176 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 MTFR1LQ9H019 292 aa13.96□□□□□ -0.17
TCF3-220ENST00000611869 DNAJC18Q9H819 358 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms