RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 PLCD4Q9BRC7 762 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 MAK16Q9BXY0 300 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 TOPORSQ9NS56 1045 aaPredicted RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 TBK1Q9UHD2 729 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 ASTN2O75129 1339 aaPredicted RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 CALB1P05937 261 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 SLC29A2Q14542 456 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 NUGGCQ68CJ6 796 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 NOP9Q86U38 636 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 EXOC8Q8IYI6 725 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 PDIK1LQ8N165 341 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 LRRC57Q8N9N7 239 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 RNF149Q8NC42 400 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 POP1Q99575 1024 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 CYP26B1Q9NR63 512 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 BAIAP2L1Q9UHR4 511 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 EXOC1LA0A1B0GW35 172 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 NDC80O14777 642 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 ZC3H11AO75152 810 aaKnown RBP eCLIP6.8□□□□□ -1.32
SNX13-213ENST00000611725 YARSP54577 528 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 SOX10P56693 466 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 TRADDQ15628 312 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 PTGISQ16647 500 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 C2CD6Q53TS8 623 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 ARHGEF18Q6ZSZ5 1173 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 APBB1IPQ7Z5R6 666 aaPredicted RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 APOBEC3FQ8IUX4 373 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 ARHGEF19Q8IW93 802 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 SCFD2Q8WU76 684 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 KRT35Q92764 455 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 P2RX7Q99572 595 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.8□□□□□ -1.32
SNX13-213ENST00000611725 TBC1D12O60347 775 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 CA4P22748 312 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 CCHCR1Q8TD31 782 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 RSAD2Q8WXG1 361 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 CPA5Q8WXQ8 436 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 C9orf72Q96LT7 481 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 EPN3Q9H201 632 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 A1CFQ9NQ94 594 aaKnown RBP6.8□□□□□ -1.32
SNX13-213ENST00000611725 TAS2R14Q9NYV8 317 aa6.8□□□□□ -1.32
SNX13-213ENST00000611725 POC1B-GALNT4F8VUJ3 575 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 PI4K2BG5E9Z4 385 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 OPLAHO14841 1288 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 PLA2G6O60733 806 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 SUN1O94901 812 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 AGTP01019 485 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 BRAFP15056 766 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 GTF2A1P52655 376 aaPredicted RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 AP3M2P53677 418 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 SNX16P57768 344 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 NCOA4Q13772 614 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ICE2Q659A1 982 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 FOXR1Q6PIV2 292 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 CCDC13Q8IYE1 715 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 TMEM161BQ8NDZ6 487 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 PPP1R14CQ8TAE6 165 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 MYCBPAPQ8TBZ2 947 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 HES6Q96HZ4 224 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 CALN1Q9BXU9 219 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 OSBPL8Q9BZF1 889 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 DMAC2Q9NW81 257 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 HACL1Q9UJ83 578 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 CLEC11AQ9Y240 323 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ADAMTS7Q9UKP4 1686 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 CDH16O75309 829 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 CCNE2O96020 404 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 FGFR4P22455 802 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 CORO7P57737 925 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 DYNLT1P63172 113 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 DLG4P78352 724 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 CAV1Q03135 178 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 DUOXA2Q1HG44 320 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 HIBCHQ6NVY1 386 aaPredicted RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 C12orf56Q8IXR9 622 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 SRRM1Q8IYB3 904 aaKnown RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 ZNF668Q96K58 619 aaPredicted RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 CFAP57Q96MR6 1250 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 XPO6Q96QU8 1125 aaKnown RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 ITIH2P19823 946 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 MARK3P27448 753 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 KRT17Q04695 432 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 MKRN4PQ13434 485 aaPredicted RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 BBS9Q3SYG4 887 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ZNF408Q9H9D4 720 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ADRB2P07550 413 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 PTGER2P43116 358 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 CCNA1P78396 465 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ZNF699Q32M78 642 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 AGBL2Q5U5Z8 902 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 TRMT10CQ7L0Y3 403 aaKnown RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 TCP11Q8WWU5 503 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ANKRD36BP1Q96IX9 119 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 EXTL3O43909 919 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 RARGP13631 454 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 SLC8A3P57103 927 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 CYP24A1Q07973 514 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 ZNF844Q08AG5 666 aa6.79□□□□□ -1.32
SNX13-213ENST00000611725 RRP1BQ14684 758 aaKnown RBP6.79□□□□□ -1.32
SNX13-213ENST00000611725 KIF22Q14807 665 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms