RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 ATP4AP20648 1035 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 MARK3P27448 753 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 ABCD1P33897 745 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 GUCY2DQ02846 1103 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 DEFB115Q30KQ5 88 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 IQSEC1Q6DN90 963 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 KDM7AQ6ZMT4 941 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 PEX26Q7Z412 305 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 GLYCTKQ8IVS8 523 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 TSEN2Q8NCE0 465 aaKnown RBP14.94□□□□□ -0.02
COPS7B-223ENST00000611614 GOLPH3Q9H4A6 298 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 MYH9P35579 1960 aaKnown RBP14.94□□□□□ -0.02
COPS7B-223ENST00000611614 NCANO14594 1321 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 EMSYQ7Z589 1322 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 CEP104O60308 925 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 TMEM253P0C7T8 217 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 RTP1P59025 263 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 TTMPQ5BVD1 217 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 MICALCLQ6ZW33 695 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
COPS7B-223ENST00000611614 LMO3Q8TAP4 145 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 TRPC6Q9Y210 931 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 MCM3APO60318 1980 aa14.94□□□□□ -0.02
COPS7B-223ENST00000611614 SLC16A4O15374 487 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 P4HA2O15460 535 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 HOXC6P09630 235 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 CARSP49589 748 aaKnown RBP14.93□□□□□ -0.02
COPS7B-223ENST00000611614 ARHGAP1Q07960 439 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 SWT1Q5T5J6 900 aaKnown RBP14.93□□□□□ -0.02
COPS7B-223ENST00000611614 CFAP58Q5T655 872 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 PHLDB3Q6NSJ2 640 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 EIF1ADQ8N9N8 165 aaKnown RBP14.93□□□□□ -0.02
COPS7B-223ENST00000611614 PPTC7Q8NI37 304 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 WHAMMQ8TF30 809 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 ATP8B4Q8TF62 1192 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 SPIRE2Q8WWL2 714 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 CEP89Q96ST8 783 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 POLR3FQ9H1D9 316 aaPredicted RBP14.93□□□□□ -0.02
COPS7B-223ENST00000611614 ST6GALNAC4Q9H4F1 302 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 PCIF1Q9H4Z3 704 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 ERAP1Q9NZ08 941 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 LRRC37A2A6NM11 1700 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 PLXNA1Q9UIW2 1896 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 TMCO5BA8MYB1 307 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 CHRM1P11229 460 aaPredicted RBP14.93□□□□□ -0.02
COPS7B-223ENST00000611614 CYP2B6P20813 491 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 TNFAIP3P21580 790 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 NPTX2P47972 431 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 VAMP7P51809 220 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 SNRPFP62306 86 aaKnown RBP14.93□□□□□ -0.02
COPS7B-223ENST00000611614 GTF2BQ00403 316 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 CETN1Q12798 172 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 KIF22Q14807 665 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 ARHGAP44Q17R89 818 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 DUSP28Q4G0W2 176 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 METTL13Q8N6R0 699 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 IFT81Q8WYA0 676 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 EMID1Q96A84 441 aaPredicted RBP14.93□□□□□ -0.02
COPS7B-223ENST00000611614 VTI1AQ96AJ9 217 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 HVCN1Q96D96 273 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 CALR3Q96L12 384 aaKnown RBP14.93□□□□□ -0.02
COPS7B-223ENST00000611614 ZIC5Q96T25 663 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 DHX33Q9H6R0 707 aaKnown RBP14.93□□□□□ -0.02
COPS7B-223ENST00000611614 NFU1Q9UMS0 254 aa14.93□□□□□ -0.02
COPS7B-223ENST00000611614 ANKRD65E5RJM6 399 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 PGRMC1O00264 195 aaKnown RBP14.92□□□□□ -0.02
COPS7B-223ENST00000611614 MAPK13O15264 365 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 RAD51CO43502 376 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 NCKAP1LP55160 1127 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 FCGRTP55899 365 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 DLG4P78352 724 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 DAAM2Q86T65 1068 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 NT5DC3Q86UY8 548 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 TRIM50Q86XT4 487 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 KLHL7Q8IXQ5 586 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 IQCKQ8N0W5 287 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 XXYLT1Q8NBI6 393 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 CASKIN2Q8WXE0 1202 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 RFFLQ8WZ73 363 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 ARL8AQ96BM9 186 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 ZIM3Q96PE6 472 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 APBA2Q99767 749 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 JPH2Q9BR39 696 aaPredicted RBP14.92□□□□□ -0.02
COPS7B-223ENST00000611614 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.92□□□□□ -0.023e-7■■■■□ 21.3
COPS7B-223ENST00000611614 KATNBL1Q9H079 304 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 PDLIM7Q9NR12 457 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 ZSCAN5CA6NGD5 496 aaPredicted RBP14.92□□□□□ -0.02
COPS7B-223ENST00000611614 TISP43B9A030 160 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 HBP1O60381 514 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 TNFAIP2Q03169 654 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 IRF5Q13568 498 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 GJC2Q5T442 439 aaPredicted RBP14.92□□□□□ -0.02
COPS7B-223ENST00000611614 RASGEF1CQ8N431 466 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 OR6J1Q8NGC5 347 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 AFG1LQ8WV93 481 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 CTNNBL1Q8WYA6 563 aaPredicted RBP14.92□□□□□ -0.02
COPS7B-223ENST00000611614 HES6Q96HZ4 224 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 CAPNS2Q96L46 248 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 CBWD1Q9BRT8 395 aa14.92□□□□□ -0.02
COPS7B-223ENST00000611614 NTPCRQ9BSD7 190 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms