RNA–Protein interactions for RNA: ENST00000611553.4

CBWD6-211, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 2,996 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-211ENST00000611553 KLC4Q9NSK0 619 aa4.41□□□□□ -1.7
CBWD6-211ENST00000611553 OLA1Q9NTK5 396 aaKnown RBP4.41□□□□□ -1.7
CBWD6-211ENST00000611553 TBCCD1Q9NVR7 557 aa4.41□□□□□ -1.7
CBWD6-211ENST00000611553 AASSQ9UDR5 926 aa4.41□□□□□ -1.7
CBWD6-211ENST00000611553 FAM169AQ9Y6X4 670 aa4.41□□□□□ -1.7
CBWD6-211ENST00000611553 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.41□□□□□ -1.7
CBWD6-211ENST00000611553 IFT140Q96RY7 1462 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 FRMD3A2A2Y4 597 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 MAGEB16A2A368 324 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 RGSL1A5PLK6 1076 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 ACOD1A6NK06 481 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 DDX39AO00148 427 aaKnown RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 HAT1O14929 419 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 NIPSNAP2O75323 286 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 SEC24DO94855 1032 aaPredicted RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 COL6A2P12110 1019 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 EZRP15311 586 aaKnown RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 VAV1P15498 845 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 SLC8A1P32418 973 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 CYLC2Q14093 348 aaPredicted RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 DSG2Q14126 1118 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 SEPT6Q14141 434 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 CBX2Q14781 532 aaPredicted RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 GPR162Q16538 588 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 SGSM1Q2NKQ1 1148 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 CCDC153Q494R4 210 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 HABP4Q5JVS0 413 aaKnown RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 TMTC4Q5T4D3 741 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 RNF219Q5W0B1 726 aaPredicted RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 TMEM132EQ6IEE7 984 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 C6orf89Q6UWU4 347 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 AGMOQ6ZNB7 445 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 PDZD4Q76G19 769 aaPredicted RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 RHOUQ7L0Q8 258 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 SESTD1Q86VW0 696 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 HEATR4Q86WZ0 1026 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 HID1Q8IV36 788 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 FAM20CQ8IXL6 584 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 CNTROBQ8N137 903 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 NKX2-3Q8TAU0 364 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 IRGQQ8WZA9 623 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 HERVK_113Q902F9 699 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 HSPH1Q92598 858 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 KIFAP3Q92845 792 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 ATP2A3Q93084 1043 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 NXPE3Q969Y0 559 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 AZIN2Q96A70 460 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 EFHD2Q96C19 240 aaPredicted RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 TSC22D3Q99576 134 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 TREX2Q9BQ50 279 aaPredicted RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 TARS2Q9BW92 718 aaKnown RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 XKR8Q9H6D3 395 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 WDR6Q9NNW5 1121 aaKnown RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 GGA3Q9NZ52 723 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 EHD3Q9NZN3 535 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 CABP1Q9NZU7 370 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 DSEQ9UL01 958 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 CNOT6Q9ULM6 557 aaKnown RBP4.4□□□□□ -1.7
CBWD6-211ENST00000611553 SPEF1Q9Y4P9 236 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 PARP3Q9Y6F1 533 aa4.4□□□□□ -1.7
CBWD6-211ENST00000611553 FLT1P17948 1338 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 CLASP1Q7Z460 1538 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 M0R2N6 131 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 WNT7AO00755 349 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 ST8SIA5O15466 376 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 NOL3O60936 208 aaKnown RBP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 CDC25CP30307 473 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 AXLP30530 894 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 GALNT1Q10472 559 aaPredicted RBP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 KCNH2Q12809 1159 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 SMAD1Q15797 465 aaKnown RBP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 INSCQ1MX18 579 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 ZNF674Q2M3X9 581 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 CMPK2Q5EBM0 449 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 RPUSD3Q6P087 351 aaKnown RBP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 SARM1Q6SZW1 724 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 ZYG11AQ6WRX3 759 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 SPATC1Q76KD6 591 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 REXO1Q8N1G1 1221 aaKnown RBP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 CNTD1Q8N815 330 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 CEP76Q8TAP6 659 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 IFI44Q8TCB0 444 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 DYDC1Q8WWB3 177 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 OPTNQ96CV9 577 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 PPP1R13BQ96KQ4 1090 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 NR1H4Q96RI1 486 aaPredicted RBP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 FERD3LQ96RJ6 166 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 HNRNPABQ99729 332 aaKnown RBP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 BCL7BQ9BQE9 202 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 SIKE1Q9BRV8 207 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 OSGEPQ9NPF4 335 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 RPRD1BQ9NQG5 326 aaKnown RBP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 TTC7AQ9ULT0 858 aaPredicted RBP4.4□□□□□ -1.71
CBWD6-211ENST00000611553 LMTK2Q8IWU2 1503 aa4.4□□□□□ -1.71
CBWD6-211ENST00000611553 A0A0G2JS52 829 aa4.39□□□□□ -1.71
CBWD6-211ENST00000611553 GPR39O43194 453 aa4.39□□□□□ -1.71
CBWD6-211ENST00000611553 PIAS2O75928 621 aa4.39□□□□□ -1.71
CBWD6-211ENST00000611553 CD2BP2O95400 341 aaKnown RBP4.39□□□□□ -1.71
CBWD6-211ENST00000611553 HLA-DPA1P20036 260 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms