RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 MIEF2Q96C03 454 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 TEKT3Q9BXF9 490 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 MIF4GDA9UHW6 222 aaKnown RBP21.8■■□□□ 1.08
SSBP3-216ENST00000610401 ASAP2O43150 1006 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 ATF7P17544 494 aaPredicted RBP21.8■■□□□ 1.08
SSBP3-216ENST00000610401 SESN3P58005 492 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 C1orf220Q5T0J3 134 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 COL23A1Q86Y22 540 aaPredicted RBP21.8■■□□□ 1.08
SSBP3-216ENST00000610401 MKL1Q969V6 931 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 SLC12A4Q9UP95 1085 aa21.8■■□□□ 1.08
SSBP3-216ENST00000610401 RASA4BC9J798 803 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 RASA4O43374 803 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 ATF2P15336 505 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 ITGB5P18084 799 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 VSIG1Q86XK7 387 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 ART4Q93070 314 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 RSRC1Q96IZ7 334 aaKnown RBP21.79■■□□□ 1.08
SSBP3-216ENST00000610401 C11orf70Q9BRQ4 267 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 DMAC2Q9NW81 257 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 PCDHA3Q9Y5H8 950 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 ZHX2Q9Y6X8 837 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 WLSQ5T9L3 541 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 RPAINQ86UA6 219 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 GLIS1Q8NBF1 620 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 KLF6Q99612 283 aaPredicted RBP21.79■■□□□ 1.08
SSBP3-216ENST00000610401 PCYOX1Q9UHG3 505 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 NAALADL1Q9UQQ1 740 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 GOLGA8RI6L899 631 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 PLCB3Q01970 1234 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 UGCGQ16739 394 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 XKR9Q5GH70 373 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 ZNF365Q70YC5 407 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 INTS8Q75QN2 995 aaKnown RBP21.79■■□□□ 1.08
SSBP3-216ENST00000610401 BICD1Q96G01 975 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 KCNH7Q9NS40 1196 aa21.79■■□□□ 1.08
SSBP3-216ENST00000610401 NFIBO00712 420 aa21.78■■□□□ 1.08
SSBP3-216ENST00000610401 AOC3Q16853 763 aa21.78■■□□□ 1.08
SSBP3-216ENST00000610401 SEZ6Q53EL9 994 aa21.78■■□□□ 1.08
SSBP3-216ENST00000610401 PITPNM3Q9BZ71 974 aa21.78■■□□□ 1.08
SSBP3-216ENST00000610401 HAO1Q9UJM8 370 aa21.78■■□□□ 1.08
SSBP3-216ENST00000610401 KRT15P19012 456 aa21.78■■□□□ 1.08
SSBP3-216ENST00000610401 FASTKD3Q14CZ7 662 aaKnown RBP21.78■■□□□ 1.08
SSBP3-216ENST00000610401 SNRNP35Q16560 246 aaKnown RBP21.78■■□□□ 1.08
SSBP3-216ENST00000610401 TUFT1Q9NNX1 390 aa21.78■■□□□ 1.08
SSBP3-216ENST00000610401 NKIRAS1Q9NYS0 192 aa21.78■■□□□ 1.08
SSBP3-216ENST00000610401 PARP2Q9UGN5 583 aa21.78■■□□□ 1.08
SSBP3-216ENST00000610401 MGAT5Q09328 741 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 SIX1Q15475 284 aaPredicted RBP21.77■■□□□ 1.08
SSBP3-216ENST00000610401 SP8Q8IXZ3 490 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 WNT8AQ9H1J5 351 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 ALAS1P13196 640 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 COPS2P61201 443 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 ZNF394Q53GI3 561 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 MOXD1Q6UVY6 613 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 C3orf20Q8ND61 904 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 SUPT20HQ8NEM7 779 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 ERP27Q96DN0 273 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 MKNK1Q9BUB5 465 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 NOCTQ9UK39 431 aaKnown RBP21.77■■□□□ 1.08
SSBP3-216ENST00000610401 DIS3Q9Y2L1 958 aaKnown RBP21.77■■□□□ 1.08
SSBP3-216ENST00000610401 CDK5RAP2Q96SN8 1893 aa21.77■■□□□ 1.08
SSBP3-216ENST00000610401 POLRMTO00411 1230 aaKnown RBP21.77■■□□□ 1.07
SSBP3-216ENST00000610401 CIITAP33076 1130 aa21.77■■□□□ 1.07
SSBP3-216ENST00000610401 CENPTQ96BT3 561 aa21.77■■□□□ 1.07
SSBP3-216ENST00000610401 NINJ2Q9NZG7 142 aa21.77■■□□□ 1.07
SSBP3-216ENST00000610401 KLHL14Q9P2G3 628 aa21.77■■□□□ 1.07
SSBP3-216ENST00000610401 ADAMTSL1Q8N6G6 1762 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 TESPA1A2RU30 521 aaPredicted RBP21.76■■□□□ 1.07
SSBP3-216ENST00000610401 TP73O15350 636 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 FOXN2P32314 431 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 PPP2R5EQ16537 467 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 ANKMY2Q8IV38 441 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 FAM213AQ9BRX8 229 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 VPS37BQ9H9H4 285 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 AFF2P51816 1311 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 DYNLT1P63172 113 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 RFX8Q6ZV50 586 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 LDHDQ86WU2 507 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 SPDL1Q96EA4 605 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 ACCSQ96QU6 501 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 STMN4Q9H169 189 aaPredicted RBP21.76■■□□□ 1.07
SSBP3-216ENST00000610401 SAYSD1Q9NPB0 183 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 A1CFQ9NQ94 594 aaKnown RBP21.76■■□□□ 1.07
SSBP3-216ENST00000610401 COL20A1Q9P218 1284 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 SAE1Q9UBE0 346 aaPredicted RBP21.76■■□□□ 1.07
SSBP3-216ENST00000610401 DCTN4Q9UJW0 460 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 MAST2Q6P0Q8 1798 aa21.76■■□□□ 1.07
SSBP3-216ENST00000610401 A0A1B0GUA9 196 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 SRRM3A6NNA2 597 aaPredicted RBP21.75■■□□□ 1.07
SSBP3-216ENST00000610401 GHRP10912 638 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 TCF4P15884 667 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 ITIH4Q14624 930 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 C11orf63Q6NUN7 778 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 HHIPL2Q6UWX4 724 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 TELO2Q9Y4R8 837 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 CENPFP49454 3210 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 TTC4O95801 387 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 ANXA13P27216 316 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 OVGP1Q12889 678 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms