RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 ANKFY1Q9P2R3 1169 aa13.96□□□□□ -0.17
CD9-212ENST00000610354 ANK1P16157 1881 aa13.96□□□□□ -0.18
CD9-212ENST00000610354 H3BQ06 376 aaPredicted RBP13.95□□□□□ -0.18
CD9-212ENST00000610354 LILRB3O75022 631 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 CXCL14O95715 111 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 CTSAP10619 480 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 GAP43P17677 238 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 KRT85P78386 507 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 SOX4Q06945 474 aaPredicted RBP13.95□□□□□ -0.18
CD9-212ENST00000610354 TUSC3Q13454 348 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 NOLC1Q14978 699 aaKnown RBP eCLIP13.95□□□□□ -0.18
CD9-212ENST00000610354 SLC10A6Q3KNW5 377 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 LEXMQ3ZCV2 418 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 CD300LGQ6UXG3 332 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 IQUBQ8NA54 791 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 HPS3Q969F9 1004 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 SNX27Q96L92 541 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 RPS6KC1Q96S38 1066 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 GPR62Q9BZJ7 368 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 TRIM9Q9C026 710 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 TNMDQ9H2S6 317 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 CUEDC2Q9H467 287 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 NGRNQ9NPE2 291 aaKnown RBP13.95□□□□□ -0.18
CD9-212ENST00000610354 ENTPD7Q9NQZ7 604 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 PANK4Q9NVE7 773 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 SERTAD1Q9UHV2 236 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 VWA8A3KMH1 1905 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 CUL9Q8IWT3 2517 aa13.95□□□□□ -0.18
CD9-212ENST00000610354 NCOR1O75376 2440 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 SMIM28A0A1B0GU29 152 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 A0A1B0GVL5 298 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 CASTOR2A6NHX0 329 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 THP07101 528 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 MYBP10242 640 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 IDEP14735 1019 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 CMA1P23946 247 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 TNFSF9P41273 254 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 SMC1AQ14683 1233 aaKnown RBP13.94□□□□□ -0.18
CD9-212ENST00000610354 ADALQ6DHV7 355 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 CNNM4Q6P4Q7 775 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 GRAMD1CQ8IYS0 662 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 BICD1Q96G01 975 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 MSLNLQ96KJ4 702 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 ACAP3Q96P50 834 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 C7orf25Q9BPX7 421 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 HERC2P3Q9BVR0 1158 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 CCDC94Q9BW85 323 aaPredicted RBP13.94□□□□□ -0.18
CD9-212ENST00000610354 GOLGA2P5Q9HBQ8 144 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 FAM13BQ9NYF5 915 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 SEL1LQ9UBV2 794 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 KCNH3Q9ULD8 1083 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 HPSEQ9Y251 543 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 IRAK3Q9Y616 596 aa13.94□□□□□ -0.18
CD9-212ENST00000610354 A0A0B4J269 797 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 FAM237AA0A1B0GTK4 181 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 CARNS1A5YM72 827 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 CLDN3O15551 220 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 NCK2O43639 380 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 ACTN4O43707 911 aaKnown RBP13.93□□□□□ -0.18
CD9-212ENST00000610354 CLASP2O75122 1294 aaKnown RBP13.93□□□□□ -0.18
CD9-212ENST00000610354 SOD2P04179 222 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 KCNE1P15382 129 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 PFKFB1P16118 471 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 SCP2P22307 547 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 LIG4P49917 911 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 COASYQ13057 564 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 HSP90AA2PQ14568 343 aaPredicted RBP13.93□□□□□ -0.18
CD9-212ENST00000610354 PTPN14Q15678 1187 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 CLUL1Q15846 466 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 HERC4Q5GLZ8 1057 aaPredicted RBP13.93□□□□□ -0.18
CD9-212ENST00000610354 APBB1IPQ7Z5R6 666 aaPredicted RBP13.93□□□□□ -0.18
CD9-212ENST00000610354 B3GALT6Q96L58 329 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 NECAB3Q96P71 396 aaPredicted RBP13.93□□□□□ -0.18
CD9-212ENST00000610354 COLEC11Q9BWP8 271 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 BLZF1Q9H2G9 400 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 MRPL44Q9H9J2 332 aaKnown RBP13.93□□□□□ -0.18
CD9-212ENST00000610354 OLFML3Q9NRN5 406 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 CNTN3Q9P232 1028 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 BARX2Q9UMQ3 279 aaPredicted RBP13.93□□□□□ -0.18
CD9-212ENST00000610354 STYXL1Q9Y6J8 313 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 PLXNA3P51805 1871 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 VCANP13611 3396 aa13.93□□□□□ -0.18
CD9-212ENST00000610354 GRXCR2A6NFK2 248 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 HNRNPDLO14979 420 aaKnown RBP13.92□□□□□ -0.18
CD9-212ENST00000610354 KIF4AO95239 1232 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 CXCL8P10145 99 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 IL9P15248 144 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 ADSSP30520 456 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 HOXD13P35453 343 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 CLCN6P51797 869 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 EHHADHQ08426 723 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 CUL4BQ13620 913 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 L1TD1Q5T7N2 865 aaKnown RBP13.92□□□□□ -0.18
CD9-212ENST00000610354 KIAA0319Q5VV43 1072 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 FUT10Q6P4F1 479 aa13.92□□□□□ -0.18
CD9-212ENST00000610354 TMEM184AQ6ZMB5 413 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms