RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 KIFC3Q9BVG8 833 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 BHMT2Q9H2M3 363 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 LRWD1Q9UFC0 647 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 CA14Q9ULX7 337 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 KIAA1024Q9UPX6 916 aa14.75□□□□□ -0.05
POLR2J3-219ENST00000608621 K7ERI5 159 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 ADAM12O43184 909 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 SRFP11831 508 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 FSHRP23945 695 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 FXR2P51116 673 aaKnown RBP eCLIP14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 EFNA5P52803 228 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 ELAVL2Q12926 359 aaKnown RBP14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 PDIA5Q14554 519 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 NBR1Q14596 966 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 ATF7IP2Q5U623 682 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 HAUS3Q68CZ6 603 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 GRASPQ7Z6J2 395 aaPredicted RBP14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 FRMD5Q7Z6J6 570 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 CCDC105Q8IYK2 499 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 FAM184AQ8NB25 1140 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 DTWD2Q8NBA8 298 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 KIFAP3Q92845 792 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 ZSCAN31Q96LW9 406 aaPredicted RBP14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 FBXW11Q9UKB1 542 aa14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 NOL7Q9UMY1 257 aaKnown RBP14.74□□□□□ -0.05
POLR2J3-219ENST00000608621 PRR23AA6NEV1 266 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 ANHXE9PGG2 379 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 TRAPPC10P48553 1259 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 NTHL1P78549 312 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 HMGN5P82970 282 aaKnown RBP14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 ANGPT1Q15389 498 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 DCAF4L1Q3SXM0 396 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 GLRA4Q5JXX5 417 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 PPM1LQ5SGD2 360 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 LIN9Q5TKA1 542 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 PDXDC1Q6P996 788 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 DCLRE1AQ6PJP8 1040 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 GPR152Q8TDT2 470 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 DDX19AQ9NUU7 478 aaKnown RBP14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 POLIQ9UNA4 740 aa14.73□□□□□ -0.05
POLR2J3-219ENST00000608621 RIF1Q5UIP0 2472 aaKnown RBP14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 CCDC169A6NNP5 214 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 E9PMD0 336 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 CCL16O15467 120 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 B3GAT3O94766 335 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 C8AP07357 584 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 HNRNPA1P09651 372 aaKnown RBP eCLIP14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 RFX1P22670 979 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 OR1D2P34982 312 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 TOB1P50616 345 aaPredicted RBP14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 CLCNKBP51801 687 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 PTGDRQ13258 359 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 HTR4Q13639 388 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 RAB33AQ14088 237 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 SNX29Q8TEQ0 813 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 NKD2Q969F2 451 aaPredicted RBP14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 PPP1R10Q96QC0 940 aaKnown RBP14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 RPP25Q9BUL9 199 aaKnown RBP14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 DAXXQ9UER7 740 aaPredicted RBP14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 TNFSF13BQ9Y275 285 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 PCDHB6Q9Y5E3 794 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 ZFP37Q9Y6Q3 630 aaPredicted RBP14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 NUMBLQ9Y6R0 609 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 TRIP11Q15643 1979 aa14.72□□□□□ -0.05
POLR2J3-219ENST00000608621 VWA8A3KMH1 1905 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 TMEM189-UBE2V1I3L0A0 370 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 FGFR3P22607 806 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 U2AF2P26368 475 aaKnown RBP eCLIP14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 PEX3P56589 373 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 UVSSAQ2YD98 709 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 AXDND1Q5T1B0 1012 aaPredicted RBP14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 PARM1Q6UWI2 310 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 CD300LGQ6UXG3 332 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 RSPO2Q6UXX9 243 aaPredicted RBP14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 CEP120Q8N960 986 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 IGSF22Q8N9C0 903 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 FGF14Q92915 247 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 ACO2Q99798 780 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 TBC1D17Q9HA65 648 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 GOLGA2P5Q9HBQ8 144 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 SH2B1Q9NRF2 756 aaPredicted RBP14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 CDH7Q9ULB5 785 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 DNM3Q9UQ16 869 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 STK24Q9Y6E0 443 aa14.71□□□□□ -0.05
POLR2J3-219ENST00000608621 SMIM28A0A1B0GU29 152 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 XYLBO75191 536 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 TKTP29401 623 aaKnown RBP14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 CDC25AP30304 524 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 HOXA9P31269 272 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 BRCC3P46736 316 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 NPTX2P47972 431 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 OSTNP61366 133 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 GPC5P78333 572 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 UPP1Q16831 310 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 PHLDB3Q6NSJ2 640 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 APBB1IPQ7Z5R6 666 aaPredicted RBP14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 DAW1Q8N136 415 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 SLC7A14Q8TBB6 771 aa14.7□□□□□ -0.06
POLR2J3-219ENST00000608621 FGF13Q92913 245 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms