RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 HTR4Q13639 388 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 FAM187BQ17R55 369 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 DCAF4L1Q3SXM0 396 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 GLRA4Q5JXX5 417 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 LILRA6Q6PI73 481 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 SLC7A14Q8TBB6 771 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 PIK3R5Q8WYR1 880 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 CLSTN3Q9BQT9 956 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 KIFC3Q9BVG8 833 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 POLD4Q9HCU8 107 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 SIT1Q9Y3P8 196 aa16.38■□□□□ 0.21
CTSA-216ENST00000607212 TRIP11Q15643 1979 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 TTLL13PA6NNM8 815 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 ACKR2O00590 384 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 PTGESO14684 152 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 EIF5BO60841 1220 aaKnown RBP16.37■□□□□ 0.21
CTSA-216ENST00000607212 HNRNPA1P09651 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
CTSA-216ENST00000607212 CYP11B2P19099 503 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 EEF1DP3Q658K8 133 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 CCDC83Q8IWF9 413 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 FAM184AQ8NB25 1140 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 LNX1Q8TBB1 728 aaPredicted RBP16.37■□□□□ 0.21
CTSA-216ENST00000607212 CDH7Q9ULB5 785 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 NOL7Q9UMY1 257 aaKnown RBP16.37■□□□□ 0.21
CTSA-216ENST00000607212 ZFP37Q9Y6Q3 630 aaPredicted RBP16.37■□□□□ 0.21
CTSA-216ENST00000607212 R4GN57 208 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 MIA3Q5JRA6 1907 aa16.37■□□□□ 0.21
CTSA-216ENST00000607212 B3GAT3O94766 335 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 RPA1P27694 616 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 OR1D2P34982 312 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 YARSP54577 528 aaKnown RBP16.36■□□□□ 0.21
CTSA-216ENST00000607212 TTC38Q5R3I4 469 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 AXDND1Q5T1B0 1012 aaPredicted RBP16.36■□□□□ 0.21
CTSA-216ENST00000607212 ATF7IP2Q5U623 682 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 PARM1Q6UWI2 310 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
CTSA-216ENST00000607212 MTSS1LQ765P7 747 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 SHDQ96IW2 340 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 FOXQ1Q9C009 403 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 CXCL16Q9H2A7 254 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 VWA8A3KMH1 1905 aa16.36■□□□□ 0.21
CTSA-216ENST00000607212 CCDC169A6NNP5 214 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 ANHXE9PGG2 379 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 LMNAP02545 664 aaKnown RBP16.35■□□□□ 0.21
CTSA-216ENST00000607212 ID4P47928 161 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 EFNA5P52803 228 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 ARPP19P56211 112 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 SNW1Q13573 536 aaKnown RBP16.35■□□□□ 0.21
CTSA-216ENST00000607212 ZC3H14Q6PJT7 736 aaKnown RBP16.35■□□□□ 0.21
CTSA-216ENST00000607212 ING5Q8WYH8 240 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 KIFAP3Q92845 792 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 CCDC94Q9BW85 323 aaPredicted RBP16.35■□□□□ 0.21
CTSA-216ENST00000607212 BHMT2Q9H2M3 363 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 KIAA1024Q9UPX6 916 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 CDY1Q9Y6F8 540 aa16.35■□□□□ 0.21
CTSA-216ENST00000607212 FAM186AA6NE01 2351 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 I3L4J1 428 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 K7ERI5 159 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 ADAM12O43184 909 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 TRAPPC3O43617 180 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 HARSP12081 509 aaKnown RBP16.34■□□□□ 0.21
CTSA-216ENST00000607212 ELF1P32519 619 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 CLCNKBP51801 687 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 OSTNP61366 133 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 GPC5P78333 572 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 UBXN2BQ14CS0 331 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 PABPC1LQ4VXU2 614 aaKnown RBP16.34■□□□□ 0.21
CTSA-216ENST00000607212 PHLDB3Q6NSJ2 640 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 ITFG1Q8TB96 612 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 FGF13Q92913 245 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 FGF14Q92915 247 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 UROC1Q96N76 676 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 KXD1Q9BQD3 176 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 RPP25Q9BUL9 199 aaKnown RBP16.34■□□□□ 0.21
CTSA-216ENST00000607212 RAB34Q9BZG1 259 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 CCDC113Q9H0I3 377 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 GOLGA2P5Q9HBQ8 144 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 SLC2A4RGQ9NR83 387 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 LRWD1Q9UFC0 647 aa16.34■□□□□ 0.21
CTSA-216ENST00000607212 LRG1P02750 347 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 EDN1P05305 212 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 TKTP29401 623 aaKnown RBP16.33■□□□□ 0.2
CTSA-216ENST00000607212 PEX3P56589 373 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 FOXK2Q01167 660 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
CTSA-216ENST00000607212 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 ANKS3Q6ZW76 656 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 C1orf210Q8IVY1 113 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 PJA1Q8NG27 643 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 SNX29Q8TEQ0 813 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 TCHPQ9BT92 498 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 BCO2Q9BYV7 579 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 FOXP1Q9H334 677 aaPredicted RBP16.33■□□□□ 0.2
CTSA-216ENST00000607212 SEMA4AQ9H3S1 761 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 TOPORSQ9NS56 1045 aaPredicted RBP16.33■□□□□ 0.2
CTSA-216ENST00000607212 DDX19AQ9NUU7 478 aaKnown RBP16.33■□□□□ 0.2
CTSA-216ENST00000607212 SPATA6Q9NWH7 488 aaPredicted RBP16.33■□□□□ 0.2
CTSA-216ENST00000607212 HCFC1R1Q9NWW0 138 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 MTRRQ9UBK8 725 aa16.33■□□□□ 0.2
CTSA-216ENST00000607212 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms