RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TCHHQ07283 1943 aa14.68□□□□□ -0.06
CTSA-213ENST00000606782 MYH15Q9Y2K3 1946 aa14.68□□□□□ -0.06
CTSA-213ENST00000606782 PHLPP2Q6ZVD8 1323 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 MTCL1Q9Y4B5 1905 aaKnown RBP14.67□□□□□ -0.06
CTSA-213ENST00000606782 PP2D1A8MPX8 630 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 SPTLC2O15270 562 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 PPP6R2O75170 966 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 TADA2AO75478 443 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 GUCY2CP25092 1073 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 CDC25AP30304 524 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 NPTX2P47972 431 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 KRT85P78386 507 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 CREMQ03060 361 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 XKR4Q5GH76 650 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 ATF7IP2Q5U623 682 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 OTOP3Q7RTS5 596 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 KCNK18Q7Z418 384 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 TDRD5Q8NAT2 981 aaKnown RBP14.67□□□□□ -0.06
CTSA-213ENST00000606782 KREMEN2Q8NCW0 462 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 PAAF1Q9BRP4 392 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 TIPINQ9BVW5 301 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 CXCL16Q9H2A7 254 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 PTPRHQ9HD43 1115 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 MAN1C1Q9NR34 630 aa14.67□□□□□ -0.06
CTSA-213ENST00000606782 SF3B1O75533 1304 aaKnown RBP eCLIP14.66□□□□□ -0.06
CTSA-213ENST00000606782 C2orf16Q68DN1 1984 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 PLXNA3P51805 1871 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 TMEM189-UBE2V1I3L0A0 370 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 SP100P23497 879 aaPredicted RBP14.66□□□□□ -0.06
CTSA-213ENST00000606782 MARCKSP29966 332 aaPredicted RBP14.66□□□□□ -0.06
CTSA-213ENST00000606782 PEX3P56589 373 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 MTMR3Q13615 1198 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 STK38Q15208 465 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 ELMSAN1Q6PJG2 1045 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 ALKAL1Q6UXT8 129 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 CCDC149Q6ZUS6 474 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 TAS1R3Q7RTX0 852 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 APBB1IPQ7Z5R6 666 aaPredicted RBP14.66□□□□□ -0.06
CTSA-213ENST00000606782 PIK3R5Q8WYR1 880 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 KCNN1Q92952 543 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 DRC1Q96MC2 740 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 PPP1R10Q96QC0 940 aaKnown RBP14.66□□□□□ -0.06
CTSA-213ENST00000606782 ACO2Q99798 780 aaKnown RBP14.66□□□□□ -0.06
CTSA-213ENST00000606782 PRRX2Q99811 253 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 RUSC1Q9BVN2 902 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 WDR6Q9NNW5 1121 aaKnown RBP14.66□□□□□ -0.06
CTSA-213ENST00000606782 LIMD1Q9UGP4 676 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 KCNG1Q9UIX4 513 aa14.66□□□□□ -0.06
CTSA-213ENST00000606782 FBXO2Q9UK22 296 aaPredicted RBP14.66□□□□□ -0.06
CTSA-213ENST00000606782 CCDC195A0A1B0GUA6 201 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 ABLIM1O14639 778 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 SLC26A4O43511 780 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 TGM5O43548 720 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 HIP1RO75146 1068 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 LIG1P18858 919 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 PROZP22891 400 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 GRM5P41594 1212 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 NHLH1Q02575 133 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 ELAVL2Q12926 359 aaKnown RBP14.65□□□□□ -0.06
CTSA-213ENST00000606782 DMP1Q13316 513 aaPredicted RBP14.65□□□□□ -0.06
CTSA-213ENST00000606782 TMEM132AQ24JP5 1023 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 RTP2Q5QGT7 225 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 CLEC17AQ6ZS10 378 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 ZBTB33Q86T24 672 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 SUGP1Q8IWZ8 645 aaKnown RBP14.65□□□□□ -0.06
CTSA-213ENST00000606782 SYT2Q8N9I0 419 aaPredicted RBP14.65□□□□□ -0.06
CTSA-213ENST00000606782 KCNG4Q8TDN1 519 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 LEO1Q8WVC0 666 aaPredicted RBP14.65□□□□□ -0.06
CTSA-213ENST00000606782 SPIRE2Q8WWL2 714 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 RIN2Q8WYP3 895 aaPredicted RBP14.65□□□□□ -0.06
CTSA-213ENST00000606782 RABGGTAQ92696 567 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 ZNF707Q96C28 371 aaPredicted RBP14.65□□□□□ -0.06
CTSA-213ENST00000606782 ACSF2Q96CM8 615 aaPredicted RBP14.65□□□□□ -0.06
CTSA-213ENST00000606782 B3GALT6Q96L58 329 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 TTPALQ9BTX7 342 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 SCAND2PQ9GZW5 306 aaPredicted RBP14.65□□□□□ -0.06
CTSA-213ENST00000606782 NT5C3AQ9H0P0 336 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 ZDHHC7Q9NXF8 308 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 KCND2Q9NZV8 630 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 CACNG4Q9UBN1 327 aa14.65□□□□□ -0.06
CTSA-213ENST00000606782 TRIP11Q15643 1979 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 VWA3AA6NCI4 1184 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 CASTOR2A6NHX0 329 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 CCDC169A6NNP5 214 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 KIF4AO95239 1232 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 LONP1P36776 959 aaKnown RBP14.64□□□□□ -0.07
CTSA-213ENST00000606782 NUBP1P53384 320 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 GRIN1Q05586 938 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 AXDND1Q5T1B0 1012 aaPredicted RBP14.64□□□□□ -0.07
CTSA-213ENST00000606782 FAM171A1Q5VUB5 890 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 PDXDC1Q6P996 788 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 CD300LGQ6UXG3 332 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 KRI1Q8N9T8 703 aaKnown RBP14.64□□□□□ -0.07
CTSA-213ENST00000606782 LNX1Q8TBB1 728 aaPredicted RBP14.64□□□□□ -0.07
CTSA-213ENST00000606782 AK8Q96MA6 479 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 CLSTN3Q9BQT9 956 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 MRPL4Q9BYD3 311 aaKnown RBP14.64□□□□□ -0.07
CTSA-213ENST00000606782 CDT1Q9H211 546 aa14.64□□□□□ -0.07
CTSA-213ENST00000606782 KMT5AQ9NQR1 393 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms