RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 GRM2Q14416 872 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 KRT32Q14532 448 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 XKR9Q5GH70 373 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 TANGO2Q6ICL3 276 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 SLC27A1Q6PCB7 646 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 FAM3CQ92520 227 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 IRF7Q92985 503 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 PAAF1Q9BRP4 392 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 TRMT61BQ9BVS5 477 aaKnown RBP17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 SLC26A6Q9BXS9 759 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 RNF26Q9BY78 433 aaPredicted RBP17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 DDX25Q9UHL0 483 aaKnown RBP17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 ZMYM2Q9UBW7 1377 aa17.09■□□□□ 0.33
NEDD8-MDP1-204ENST00000605847 EML1O00423 815 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ADAM12O43184 909 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 KIF4AO95239 1232 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 PPP2R5CQ13362 524 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 RAB33AQ14088 237 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ADCK5Q3MIX3 580 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 N4BP2L1Q5TBK1 243 aaPredicted RBP17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CEP68Q76N32 757 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CDR2LQ86X02 465 aaPredicted RBP17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 C12orf50Q8NA57 414 aaPredicted RBP17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 LXNQ9BS40 222 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ZFP14Q9HCL3 533 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 SH3GLB2Q9NR46 395 aa17.08■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 SHISA7A6NL88 538 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 LRG1P02750 347 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 PTPN2P17706 415 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 SHC2P98077 582 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 SATB1Q01826 763 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 MBTD1Q05BQ5 628 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 MOXD1Q6UVY6 613 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 C4orf19Q8IY42 314 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 WRAP73Q9P2S5 460 aaPredicted RBP17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 PCDHA4Q9UN74 947 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 PIAS3Q9Y6X2 628 aa17.07■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CACNA1GO43497 2377 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CHURC1-FNTBB4DL54 471 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 HRO43593 1189 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 MARCH6O60337 910 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 THP07101 528 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CEBPBP17676 345 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 FNTBP49356 437 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 POU5F1BQ06416 359 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 SLC5A9Q2M3M2 681 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 Q6ZUG5 572 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 LONP2Q86WA8 852 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 BRF1Q92994 677 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CDY1Q9Y6F8 540 aa17.06■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 B4GALT5O43286 388 aa17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 GDI1P31150 447 aa17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ELF1P32519 619 aa17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 SRSF5Q13243 272 aaKnown RBP17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 AMHR2Q16671 573 aa17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 HEATR6Q6AI08 1181 aaKnown RBP17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 IFNLR1Q8IU57 520 aaPredicted RBP17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ZNF687Q8N1G0 1237 aa17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 FAM20AQ96MK3 541 aa17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CCDC43Q96MW1 224 aaKnown RBP17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ZSWIM4Q9H7M6 989 aa17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ZNF334Q9HCZ1 680 aaPredicted RBP17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 AVENQ9NQS1 362 aaPredicted RBP17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 MTRRQ9UBK8 725 aa17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 USP24Q9UPU5 2620 aa17.05■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 A0A1B0GUA9 196 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ZNF197O14709 1029 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 PROS1P07225 676 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 PSMC3P17980 439 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 LIMK1P53667 647 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 SPIRE1Q08AE8 756 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CAPSQ13938 189 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 LRRC32Q14392 662 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 EPHA7Q15375 998 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 TSGA10IPQ3SY00 556 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 RASEFQ8IZ41 740 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 BLIDQ8IZY5 108 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 SPEM1Q8N4L4 309 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 FAM160A2Q8N612 972 aaPredicted RBP17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CORO1BQ9BR76 489 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 NFKBIZQ9BYH8 718 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 TRPV5Q9NQA5 729 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 VAV3Q9UKW4 847 aa17.04■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 NID2Q14112 1375 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CHD8Q9HCK8 2581 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CHD6Q8TD26 2715 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 PRRG1O14668 218 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ZNF263O14978 683 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 SLC37A4O43826 429 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CHRNB1P11230 501 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 IFNAR1P17181 557 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 FCARP24071 287 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CCNE1P24864 410 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 CTTNQ14247 550 aaKnown RBP17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 ACAP1Q15027 740 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 NTRK3Q16288 839 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 INF2Q27J81 1249 aa17.03■□□□□ 0.32
NEDD8-MDP1-204ENST00000605847 FAM78AQ5JUQ0 283 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms