RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 HTTP42858 3142 aa20.73■□□□□ 0.91
TUBB4B-202ENST00000604929 ENC1O14682 589 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 ZEB2O60315 1214 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 PGK1P00558 417 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 ENPEPQ07075 957 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 AMHR2Q16671 573 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 GNASQ5JWF2 1037 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 TMEM192Q8IY95 271 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 SECISBP2LQ93073 1101 aaKnown RBP20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 TSGA10Q9BZW7 698 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 L2HGDHQ9H9P8 463 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 CDHR5Q9HBB8 845 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 ACP6Q9NPH0 428 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 RNF186Q9NXI6 227 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 NAGPAQ9UK23 515 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 CPSF3Q9UKF6 684 aaKnown RBP20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 TNFSF13BQ9Y275 285 aa20.72■□□□□ 0.91
TUBB4B-202ENST00000604929 CTAGE9A4FU28 777 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 GPR25O00155 361 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 CLSTN1O94985 981 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 VNN1O95497 513 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 HLA-DRAP01903 254 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 CYP2C9P11712 490 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 MFAP3P55082 362 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 SPOPLQ6IQ16 392 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 ALKBH5Q6P6C2 394 aaKnown RBP20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 RUFY4Q6ZNE9 571 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 GLYCTKQ8IVS8 523 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 BRSK2Q8IWQ3 736 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 CDT1Q9H211 546 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 DDX3XO00571 662 aaKnown RBP eCLIP20.71■□□□□ 0.913e-30■■■□□ 14.6
TUBB4B-202ENST00000604929 TREHO43280 583 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 PHACTR2O75167 634 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 DUSP11O75319 330 aaKnown RBP20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 MOCS3O95396 460 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 MYCNP04198 464 aaPredicted RBP20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 CYBAP13498 195 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 ARF4P18085 180 aaPredicted RBP20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 PIK3CAP42336 1068 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 NAP1L1P55209 391 aaKnown RBP20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 VPS36Q86VN1 386 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 DHX38Q92620 1227 aaKnown RBP20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 CGRRF1Q99675 332 aa20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 SEPT11Q9NVA2 429 aaKnown RBP20.71■□□□□ 0.91
TUBB4B-202ENST00000604929 TMCO5BA8MYB1 307 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 BUB1O43683 1085 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 CCDC172P0C7W6 258 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 ELNP15502 786 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 PURAQ00577 322 aaKnown RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 HSP90AA2PQ14568 343 aaPredicted RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 IFNLR1Q8IU57 520 aaPredicted RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 LNX1Q8TBB1 728 aaPredicted RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 U2AF1L4Q8WU68 220 aaKnown RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 DNAJB3Q8WWF6 145 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 CREBZFQ9NS37 354 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 HDAC6Q9UBN7 1215 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 DAAM1Q9Y4D1 1078 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 HAS3O00219 553 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 PJA2O43164 708 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 CYP26A1O43174 497 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 CST3P01034 146 aaPredicted RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 CACNB2Q08289 660 aaPredicted RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 NAA30Q147X3 362 aaPredicted RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 KIF22Q14807 665 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 FAM187BQ17R55 369 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 WDR44Q5JSH3 913 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 LRRN4CLQ8ND94 238 aa20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 NAPGQ99747 312 aaPredicted RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 LUC7LQ9NQ29 371 aaKnown RBP20.7■□□□□ 0.9
TUBB4B-202ENST00000604929 ERLIN2O94905 339 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 SGPL1O95470 568 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 BMS1Q14692 1282 aaKnown RBP20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 NAB2Q15742 525 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 C7orf31Q8N865 590 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 SLC20A1Q8WUM9 679 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 ARID3AQ99856 593 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 MTMR12Q9C0I1 747 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 ADAMTS10Q9H324 1103 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 PDZD7Q9H5P4 517 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 CAPN6Q9Y6Q1 641 aa20.69■□□□□ 0.9
TUBB4B-202ENST00000604929 MBLAC1A4D2B0 266 aaPredicted RBP20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 GPR32O75388 356 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 SLU7O95391 586 aaKnown RBP20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 CXCL8P10145 99 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 TNFAIP3P21580 790 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 GTF2F1P35269 517 aaKnown RBP eCLIP20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 HTRA3P83110 453 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 TFAMQ00059 246 aaKnown RBP20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 CXCL17Q6UXB2 119 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 SLC47A2Q86VL8 602 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 SLC30A5Q8TAD4 765 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 OSMRQ99650 979 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 V9GYY5 206 aaPredicted RBP20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 CEP350Q5VT06 3117 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 TSPAN1O60635 241 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 APLP1P51693 650 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 ADAM17P78536 824 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 ZNF410Q86VK4 478 aa20.68■□□□□ 0.9
TUBB4B-202ENST00000604929 FAM71AQ8IYT1 594 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms