RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 CRACR2BQ8N4Y2 399 aaPredicted RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CPLX3Q8WVH0 158 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 ZNF653Q96CK0 615 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 VPS39Q96JC1 886 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 GAL3ST1Q99999 423 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 SLC12A5Q9H2X9 1139 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 MYO1AQ9UBC5 1043 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 MED16Q9Y2X0 877 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 RRP7AQ9Y3A4 280 aaKnown RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 NRXN2Q9P2S2 1712 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 WASLO00401 505 aaPredicted RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 NIPSNAP2O75323 286 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 RPS6KA5O75582 802 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 SLITRK3O94933 977 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 FAM13AO94988 1023 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CD2BP2O95400 341 aaKnown RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CYP11A1P05108 521 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CKBP12277 381 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 ALADP13716 330 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CTRB1P17538 263 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 SSTR3P32745 418 aaPredicted RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 ACSL1P33121 698 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 IFNAR2P48551 515 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 AARSP49588 968 aaKnown RBP eCLIP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 THOP1P52888 689 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 ZNF445P59923 1031 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 ITKQ08881 620 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 PDE3AQ14432 1141 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 ANO4Q32M45 955 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CEP55Q53EZ4 464 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 DCAF17Q5H9S7 520 aaPredicted RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CTRB2Q6GPI1 263 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 ZSCAN1Q8NBB4 408 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CHST13Q8NET6 341 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CCDC127Q96BQ5 260 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 ZC3H10Q96K80 434 aaKnown RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 SECISBP2Q96T21 854 aaKnown RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 LMAN2LQ9H0V9 348 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 TMEM206Q9H813 350 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 NEK6Q9HC98 313 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 IARS2Q9NSE4 1012 aaKnown RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 LNPEPQ9UIQ6 1025 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 PCOLCE2Q9UKZ9 415 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CHTOPQ9Y3Y2 248 aaKnown RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 NSD2O96028 1365 aa6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 IBTKQ9P2D0 1353 aaPredicted RBP6.22□□□□□ -1.41
COL4A3BP-207ENST00000604926 CYP3A7-CYP3A51PA0A087WV96 503 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 A0A1B0GVC2 190 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 H3BUI4 141 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 IKBKBO14920 756 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 LGR5O75473 907 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 CYP3A7P24462 503 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 MZF1P28698 734 aaPredicted RBP6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 HNMTP50135 292 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 SLC26A5P58743 744 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 OLR1P78380 273 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 LIPEQ05469 1076 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 CCINQ13939 588 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 TLR1Q15399 786 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 MEA1Q16626 185 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 SLC44A4Q53GD3 710 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 TRAPPC3LQ5T215 181 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 C6orf183Q5T699 404 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 AAGABQ6PD74 315 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 FOXR1Q6PIV2 292 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 SRGAP1Q7Z6B7 1085 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 MRPL10Q7Z7H8 261 aaKnown RBP6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 EXOC3L1Q86VI1 746 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 NKAIN4Q8IVV8 208 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 REXO1L1PQ8IX06 675 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 FBF1Q8TES7 1133 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 NT5C3AQ9H0P0 336 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 BHMT2Q9H2M3 363 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 SEMA3GQ9NS98 782 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 OLA1Q9NTK5 396 aaKnown RBP6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 SPTLC3Q9NUV7 552 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 PCMTD2Q9NV79 361 aa6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 CORO1CQ9ULV4 474 aaPredicted RBP6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 KTN1Q86UP2 1357 aaKnown RBP6.21□□□□□ -1.41
COL4A3BP-207ENST00000604926 SFI1A8K8P3 1242 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 A8MX80 341 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 FOXO6A8MYZ6 492 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 ALG1L2C9J202 215 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 F8W810 466 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 GOLGA8SH3BPF8 625 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 LRRN2O75325 713 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 ASMTLO95671 621 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 ABCB1P08183 1280 aaPredicted RBP6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 NAGAP17050 411 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 GAP43P17677 238 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 KRT2P35908 639 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 TRIM23P36406 574 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 TXLNAP40222 546 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 KCNJ6P48051 423 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 ZNF280AP59817 542 aaPredicted RBP6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 SCARB2Q14108 478 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 DOC2AQ14183 400 aa6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 ELOAQ14241 798 aaKnown RBP6.21□□□□□ -1.42
COL4A3BP-207ENST00000604926 CWF19L2Q2TBE0 894 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms