RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 MAN2B1O00754 1011 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 SLC37A4O43826 429 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 DKC1O60832 514 aaKnown RBP eCLIP13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CPA1P15085 419 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 YWHABP31946 246 aaKnown RBP13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CCR3P51677 355 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 TUSC3Q13454 348 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 COL9A2Q14055 689 aaPredicted RBP13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 GRM2Q14416 872 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CSRP2Q16527 193 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 TANGO2Q6ICL3 276 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 BRF1Q92994 677 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 MTRQ99707 1265 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 LXNQ9BS40 222 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 RNF26Q9BY78 433 aaPredicted RBP13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 C22orf23Q9BZE7 217 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 GDE1Q9NZC3 331 aa13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CNOT1A5YKK6 2376 aaKnown RBP13.08□□□□□ -0.32
PDLIM1P1-201ENST00000604187 NID2Q14112 1375 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 ZMYM2Q9UBW7 1377 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 P4HBP07237 508 aaKnown RBP13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 RHOP08100 348 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CEBPBP17676 345 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FCARP24071 287 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 OR1D2P34982 312 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 SATB1Q01826 763 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 SRSF5Q13243 272 aaKnown RBP13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PPP2R5CQ13362 524 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CAPSQ13938 189 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 RAB33AQ14088 237 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 TFDP1Q14186 410 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 KRT32Q14532 448 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 MXD4Q14582 209 aaPredicted RBP13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 XKR9Q5GH70 373 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 IL31Q6EBC2 164 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PDXDC1Q6P996 788 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 SLC27A1Q6PCB7 646 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 POTEHQ6S545 545 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 ASAP3Q8TDY4 903 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 DDX1Q92499 740 aaKnown RBP13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 IER2Q9BTL4 223 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 BRD9Q9H8M2 597 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 XPNPEP1Q9NQW7 623 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PCDHA4Q9UN74 947 aa13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FASNP49327 2511 aaKnown RBP13.07□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PKD1L2Q7Z442 2459 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CHURC1-FNTBB4DL54 471 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 HMGB1P09429 215 aaKnown RBP13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PMLP29590 882 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CXCL12P48061 93 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FNTBP49356 437 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 ELAVL2Q12926 359 aaKnown RBP13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 NTRK3Q16288 839 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 UVSSAQ2YD98 709 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 TSGA10IPQ3SY00 556 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 N4BP2L1Q5TBK1 243 aaPredicted RBP13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 MOXD1Q6UVY6 613 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 Q6ZUG5 572 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 OTUD6AQ7L8S5 288 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 IFNLR1Q8IU57 520 aaPredicted RBP13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 C4orf19Q8IY42 314 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FAM3CQ92520 227 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 LMAN1LQ9HAT1 526 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 RGL1Q9NZL6 768 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CDY1Q9Y6F8 540 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PIAS3Q9Y6X2 628 aa13.06□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PTGESO14684 152 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 ZBTB39O15060 712 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 HRO43593 1189 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FOXD2O60548 495 aaPredicted RBP13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 IFNAR1P17181 557 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CYP4A11Q02928 519 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CTTNQ14247 550 aaKnown RBP13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 INF2Q27J81 1249 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 FAM78AQ5JUQ0 283 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 PIP4P2Q8N4L2 257 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 TRMT61BQ9BVS5 477 aaKnown RBP13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 NCOA5Q9HCD5 579 aaKnown RBP13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 KCNMB3Q9NPA1 279 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 MTRRQ9UBK8 725 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 SPEGQ15772 3267 aa13.05□□□□□ -0.32
PDLIM1P1-201ENST00000604187 MYH9P35579 1960 aaKnown RBP13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 A0A1B0GUA9 196 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 SHC2P98077 582 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 POU5F1BQ06416 359 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 GAS6Q14393 721 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 EPHA7Q15375 998 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 AASDHQ4L235 1098 aaPredicted RBP13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 HEATR6Q6AI08 1181 aaKnown RBP13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 NCAPH2Q6IBW4 605 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 BLIDQ8IZY5 108 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 IRF7Q92985 503 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 DYDC2Q96IM9 177 aa13.04□□□□□ -0.32
PDLIM1P1-201ENST00000604187 CXCL16Q9H2A7 254 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms