RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 TPRP12270 2363 aaKnown RBP18.65■□□□□ 0.58
CCDC12-210ENST00000604181 SF3B1O75533 1304 aaKnown RBP eCLIP18.65■□□□□ 0.583e-6■■■■■ 41.8
CCDC12-210ENST00000604181 ZMYM2Q9UBW7 1377 aa18.65■□□□□ 0.58
CCDC12-210ENST00000604181 F5P12259 2224 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 MED19A0JLT2 244 aaPredicted RBP18.64■□□□□ 0.57
CCDC12-210ENST00000604181 RECQL4O94761 1208 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 C8AP07357 584 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 FOSBP53539 338 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 STARD6P59095 220 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 SNW1Q13573 536 aaKnown RBP18.64■□□□□ 0.57
CCDC12-210ENST00000604181 PSMD5Q16401 504 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 EEF1DP3Q658K8 133 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 CDCA2Q69YH5 1023 aaPredicted RBP18.64■□□□□ 0.57
CCDC12-210ENST00000604181 FGF13Q92913 245 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 SEMA4AQ9H3S1 761 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 FZD8Q9H461 694 aa18.64■□□□□ 0.57
CCDC12-210ENST00000604181 BTBD18B2RXH4 712 aa18.63■□□□□ 0.57
CCDC12-210ENST00000604181 CREMQ03060 361 aa18.63■□□□□ 0.57
CCDC12-210ENST00000604181 RSPO2Q6UXX9 243 aaPredicted RBP18.63■□□□□ 0.57
CCDC12-210ENST00000604181 NOSTRINQ8IVI9 506 aa18.63■□□□□ 0.57
CCDC12-210ENST00000604181 NEMFO60524 1076 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 MED24O75448 989 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 FAM187BQ17R55 369 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 PPM1LQ5SGD2 360 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 CD300LGQ6UXG3 332 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 SUMF1Q8NBK3 374 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 SLC7A14Q8TBB6 771 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 CCDC43Q96MW1 224 aaKnown RBP18.62■□□□□ 0.57
CCDC12-210ENST00000604181 KXD1Q9BQD3 176 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 DDX23Q9BUQ8 820 aaKnown RBP18.62■□□□□ 0.57
CCDC12-210ENST00000604181 POLD4Q9HCU8 107 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 PRMT7Q9NVM4 692 aaPredicted RBP18.62■□□□□ 0.57
CCDC12-210ENST00000604181 POLIQ9UNA4 740 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 PATJQ8NI35 1801 aa18.62■□□□□ 0.57
CCDC12-210ENST00000604181 JAK2O60674 1132 aa18.61■□□□□ 0.57
CCDC12-210ENST00000604181 THP07101 528 aa18.61■□□□□ 0.57
CCDC12-210ENST00000604181 HNRNPA1P09651 372 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCDC12-210ENST00000604181 CD72P21854 359 aa18.61■□□□□ 0.57
CCDC12-210ENST00000604181 ME3Q16798 604 aa18.61■□□□□ 0.57
CCDC12-210ENST00000604181 LIN9Q5TKA1 542 aa18.61■□□□□ 0.57
CCDC12-210ENST00000604181 CATSPER3Q86XQ3 398 aa18.61■□□□□ 0.57
CCDC12-210ENST00000604181 ING5Q8WYH8 240 aa18.61■□□□□ 0.57
CCDC12-210ENST00000604181 PRIMPOLQ96LW4 560 aa18.61■□□□□ 0.57
CCDC12-210ENST00000604181 CCDC113Q9H0I3 377 aa18.61■□□□□ 0.57
CCDC12-210ENST00000604181 DNMT3BQ9UBC3 853 aaKnown RBP18.61■□□□□ 0.57
CCDC12-210ENST00000604181 ZFP37Q9Y6Q3 630 aaPredicted RBP18.61■□□□□ 0.57
CCDC12-210ENST00000604181 KANSL1LA0AUZ9 987 aa18.6■□□□□ 0.57
CCDC12-210ENST00000604181 HOXA9P31269 272 aa18.6■□□□□ 0.57
CCDC12-210ENST00000604181 OR1D2P34982 312 aa18.6■□□□□ 0.57
CCDC12-210ENST00000604181 MLF2Q15773 248 aaPredicted RBP18.6■□□□□ 0.57
CCDC12-210ENST00000604181 GLRA4Q5JXX5 417 aa18.6■□□□□ 0.57
CCDC12-210ENST00000604181 AXDND1Q5T1B0 1012 aaPredicted RBP18.6■□□□□ 0.57
CCDC12-210ENST00000604181 NPAS3Q8IXF0 933 aa18.6■□□□□ 0.57
CCDC12-210ENST00000604181 DIS3L2Q8IYB7 885 aaKnown RBP18.6■□□□□ 0.57
CCDC12-210ENST00000604181 NSUN7Q8NE18 718 aaKnown RBP18.6■□□□□ 0.57
CCDC12-210ENST00000604181 KIFC3Q9BVG8 833 aa18.6■□□□□ 0.57
CCDC12-210ENST00000604181 GDAQ9Y2T3 454 aa18.6■□□□□ 0.57
CCDC12-210ENST00000604181 EPG5Q9HCE0 2579 aa18.6■□□□□ 0.57
CCDC12-210ENST00000604181 CACNA1BQ00975 2339 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 SHISA7A6NL88 538 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 I3L4J1 428 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 N4BP3O15049 544 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 PRKCBP05771 671 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 XRCC6P12956 609 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCDC12-210ENST00000604181 LIG1P18858 919 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 ATP2B1P20020 1258 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 FGFR3P22607 806 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 ST3GAL1Q11201 340 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 PRPF4BQ13523 1007 aaKnown RBP18.59■□□□□ 0.57
CCDC12-210ENST00000604181 RAB33AQ14088 237 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 SLC5A9Q2M3M2 681 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 SLC44A4Q53GD3 710 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 C3orf58Q8NDZ4 430 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 HINFPQ9BQA5 517 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 PLA2G2FQ9BZM2 168 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 GOLGA2P5Q9HBQ8 144 aa18.59■□□□□ 0.57
CCDC12-210ENST00000604181 NRG2O14511 850 aaPredicted RBP18.58■□□□□ 0.56
CCDC12-210ENST00000604181 TKTP29401 623 aaKnown RBP18.58■□□□□ 0.56
CCDC12-210ENST00000604181 UBXN2BQ14CS0 331 aa18.58■□□□□ 0.56
CCDC12-210ENST00000604181 ZC3H14Q6PJT7 736 aaKnown RBP18.58■□□□□ 0.56
CCDC12-210ENST00000604181 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.58■□□□□ 0.56
CCDC12-210ENST00000604181 DGLUCYQ7Z3D6 616 aa18.58■□□□□ 0.56
CCDC12-210ENST00000604181 ZBTB8OSQ8IWT0 167 aa18.58■□□□□ 0.56
CCDC12-210ENST00000604181 MCPH1Q8NEM0 835 aa18.58■□□□□ 0.56
CCDC12-210ENST00000604181 WASF1Q92558 559 aa18.58■□□□□ 0.56
CCDC12-210ENST00000604181 RUBCNQ92622 972 aa18.58■□□□□ 0.56
CCDC12-210ENST00000604181 GTF3C6Q969F1 213 aa18.58■□□□□ 0.56
CCDC12-210ENST00000604181 PPP1R10Q96QC0 940 aaKnown RBP18.58■□□□□ 0.56
CCDC12-210ENST00000604181 BRMS1Q9HCU9 246 aa18.58■□□□□ 0.56
CCDC12-210ENST00000604181 MTRRQ9UBK8 725 aa18.58■□□□□ 0.56
CCDC12-210ENST00000604181 FAM170BA6NMN3 283 aa18.57■□□□□ 0.56
CCDC12-210ENST00000604181 ACKR2O00590 384 aa18.57■□□□□ 0.56
CCDC12-210ENST00000604181 XYLBO75191 536 aa18.57■□□□□ 0.56
CCDC12-210ENST00000604181 TARSP26639 723 aaKnown RBP18.57■□□□□ 0.56
CCDC12-210ENST00000604181 MCM7P33993 719 aa18.57■□□□□ 0.56
CCDC12-210ENST00000604181 BRCC3P46736 316 aa18.57■□□□□ 0.56
CCDC12-210ENST00000604181 CLCNKBP51801 687 aa18.57■□□□□ 0.56
CCDC12-210ENST00000604181 ECM1Q16610 540 aa18.57■□□□□ 0.56
CCDC12-210ENST00000604181 MAPK6Q16659 721 aa18.57■□□□□ 0.56
CCDC12-210ENST00000604181 PABPC1LQ4VXU2 614 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms