RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SLC8A1P32418 973 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 PIK3CBP42338 1070 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 EIF6P56537 245 aaKnown RBP5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 GNAI1P63096 354 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 GRB10Q13322 594 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 DYNC1I2Q13409 638 aaKnown RBP5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 CNGA3Q16281 694 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 EMC10Q5UCC4 262 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 ETFBKMTQ8IXQ9 262 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 SYNPOQ8N3V7 929 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 FERD3LQ96RJ6 166 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 NACAP1Q9BZK3 213 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 MTFR1LQ9H019 292 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 SLC39A2Q9NP94 309 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 MARK1Q9P0L2 795 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 FOXD3Q9UJU5 478 aaPredicted RBP5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 ANKRD6Q9Y2G4 727 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 PTPN22Q9Y2R2 807 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 FAM169AQ9Y6X4 670 aa5.4□□□□□ -1.54
SPTBN1-206ENST00000602898 KIAA1210Q9ULL0 1709 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 ANKRD65E5RJM6 399 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 KDM1AO60341 852 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 TBCAO75347 108 aaKnown RBP5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 PENKP01210 267 aaPredicted RBP5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 C6orf222P0C671 652 aaPredicted RBP5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 JMJD7P0C870 316 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 RARGP13631 454 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 TFEBP19484 476 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 TKTL1P51854 596 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 SMTNP53814 917 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 HOOK3Q86VS8 718 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 CCDC33Q8N5R6 958 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 AVL9Q8NBF6 648 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 DNAJB8Q8NHS0 232 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 PPP1R14BQ96C90 147 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 TTC1Q99614 292 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 FUT8Q9BYC5 575 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 PCDH18Q9HCL0 1135 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 TOR4AQ9NXH8 423 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 PAIP2BQ9ULR5 123 aaKnown RBP5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 APOBEC2Q9Y235 224 aaKnown RBP5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 LRCH1Q9Y2L9 728 aa5.4□□□□□ -1.55
SPTBN1-206ENST00000602898 FRMD3A2A2Y4 597 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 ZNF891A8MT65 544 aaPredicted RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 INO80B-WBP1J3KQ70 363 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 IRAK2O43187 625 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 MAFO75444 373 aaPredicted RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PYGMP11217 842 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 CCT8P50990 548 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 AFF3P51826 1226 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 ARPC4P59998 168 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 CTAG1AP78358 180 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 NMIQ13287 307 aaPredicted RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 BMPR2Q13873 1038 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 GRIN2CQ14957 1233 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 WDR43Q15061 677 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 TLR1Q15399 786 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 CTC1Q2NKJ3 1217 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 C1orf141Q5JVX7 400 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 CCDC122Q5T0U0 273 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 IQSEC1Q6DN90 963 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 TMEM132EQ6IEE7 984 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 MARK2Q7KZI7 788 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 AGR3Q8TD06 166 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 NOC3LQ8WTT2 800 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 HSPBAP1Q96EW2 488 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 TMEM74Q96NL1 305 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 TSEN34Q9BSV6 310 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 ADAM19Q9H013 955 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 KIAA1683Q9H0B3 1180 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 ARFGAP3Q9NP61 516 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 CCDC177Q9NQR7 707 aaPredicted RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 KLC4Q9NSK0 619 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 SIRT5Q9NXA8 310 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 DDX25Q9UHL0 483 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 DNAI1Q9UI46 699 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 C19orf53Q9UNZ5 99 aaPredicted RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 AP1M2Q9Y6Q5 423 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 DUOX2Q9NRD8 1548 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 CCDC141Q6ZP82 1450 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PNPLA6Q8IY17 1366 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 SYNJ2BP-COX16A0A087WUM0 186 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 A8MVJ9 347 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 K7EPI3 171 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 EBAG9O00559 213 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PCDHGA12O60330 932 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 NEMFO60524 1076 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 USO1O60763 962 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 SRGAP2O75044 1071 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 H2AFYO75367 372 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 HMOX1P09601 288 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PDHBP11177 359 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PDIA3P30101 505 aaKnown RBP5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 NR2C2P49116 596 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 GPR85P60893 370 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 C19orf57Q0VDD7 668 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 LRMPQ12912 555 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 ZNF423Q2M1K9 1284 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 PROSER3Q2NL68 480 aa5.39□□□□□ -1.55
SPTBN1-206ENST00000602898 BOLA3Q53S33 107 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms