RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 KIAA1024Q9UPX6 916 aa14.5□□□□□ -0.09
RPS28-204ENST00000602140 STK25O00506 426 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 LAMP2P13473 410 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 NBL1P41271 181 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 ELAVL2Q12926 359 aaKnown RBP14.49□□□□□ -0.09
RPS28-204ENST00000602140 DCAF4L1Q3SXM0 396 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 GLRA4Q5JXX5 417 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 NT5DC1Q5TFE4 455 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 ATF7IP2Q5U623 682 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 NXPE3Q969Y0 559 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 ZSCAN31Q96LW9 406 aaPredicted RBP14.49□□□□□ -0.09
RPS28-204ENST00000602140 RTP3Q9BQQ7 232 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 DDX19AQ9NUU7 478 aaKnown RBP14.49□□□□□ -0.09
RPS28-204ENST00000602140 WNT16Q9UBV4 365 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 FBXW11Q9UKB1 542 aa14.49□□□□□ -0.09
RPS28-204ENST00000602140 MTCL1Q9Y4B5 1905 aaKnown RBP14.49□□□□□ -0.09
RPS28-204ENST00000602140 CFAP54Q96N23 3096 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 KRBA1A5PL33 1030 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 K7ERI5 159 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 ADAM12O43184 909 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 SRFP11831 508 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 FSHRP23945 695 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 IGFBP6P24592 240 aaPredicted RBP14.48□□□□□ -0.09
RPS28-204ENST00000602140 PTGDRQ13258 359 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 PDIA5Q14554 519 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 LIN9Q5TKA1 542 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 PDXDC1Q6P996 788 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 ASCL5Q7RTU5 278 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 GRASPQ7Z6J2 395 aaPredicted RBP14.48□□□□□ -0.09
RPS28-204ENST00000602140 CCDC105Q8IYK2 499 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 ST13P5Q8NFI4 369 aaPredicted RBP14.48□□□□□ -0.09
RPS28-204ENST00000602140 SNX29Q8TEQ0 813 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 SH2B1Q9NRF2 756 aaPredicted RBP14.48□□□□□ -0.09
RPS28-204ENST00000602140 CA14Q9ULX7 337 aa14.48□□□□□ -0.09
RPS28-204ENST00000602140 VPS13AQ96RL7 3174 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 CCDC169A6NNP5 214 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 CCL16O15467 120 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 B3GAT3O94766 335 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 C8AP07357 584 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 HNRNPA1P09651 372 aaKnown RBP eCLIP14.47□□□□□ -0.09
RPS28-204ENST00000602140 RFX1P22670 979 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 U2AF2P26368 475 aaKnown RBP eCLIP14.47□□□□□ -0.09
RPS28-204ENST00000602140 TOB1P50616 345 aaPredicted RBP14.47□□□□□ -0.09
RPS28-204ENST00000602140 CLCNKBP51801 687 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 PEX3P56589 373 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 NTHL1P78549 312 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 HTR4Q13639 388 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 PPM1LQ5SGD2 360 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.47□□□□□ -0.09
RPS28-204ENST00000602140 FRMD5Q7Z6J6 570 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 IGSF22Q8N9C0 903 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 DTWD2Q8NBA8 298 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 GPR152Q8TDT2 470 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 PPP1R10Q96QC0 940 aaKnown RBP14.47□□□□□ -0.09
RPS28-204ENST00000602140 KIF2CQ99661 725 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 RAB34Q9BZG1 259 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 POLIQ9UNA4 740 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 PCDHB6Q9Y5E3 794 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 STK24Q9Y6E0 443 aa14.47□□□□□ -0.09
RPS28-204ENST00000602140 PRR23AA6NEV1 266 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 PP2D1A8MPX8 630 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 ANHXE9PGG2 379 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 E9PMD0 336 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 TMEM189-UBE2V1I3L0A0 370 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 FGFR3P22607 806 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 OR1D2P34982 312 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 NPTX2P47972 431 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 RAB33AQ14088 237 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 ANGPT1Q15389 498 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 AXDND1Q5T1B0 1012 aaPredicted RBP14.46□□□□□ -0.09
RPS28-204ENST00000602140 DCLRE1AQ6PJP8 1040 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 APBB1IPQ7Z5R6 666 aaPredicted RBP14.46□□□□□ -0.09
RPS28-204ENST00000602140 CEP120Q8N960 986 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 SLC7A14Q8TBB6 771 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 ACO2Q99798 780 aaKnown RBP14.46□□□□□ -0.09
RPS28-204ENST00000602140 TBC1D17Q9HA65 648 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 GOLGA2P5Q9HBQ8 144 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.09
RPS28-204ENST00000602140 DNM3Q9UQ16 869 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 TNFSF13BQ9Y275 285 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 ZFP37Q9Y6Q3 630 aaPredicted RBP14.46□□□□□ -0.09
RPS28-204ENST00000602140 NUMBLQ9Y6R0 609 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 DOCK8Q8NF50 2099 aa14.46□□□□□ -0.09
RPS28-204ENST00000602140 PHLPP2Q6ZVD8 1323 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 SMIM28A0A1B0GU29 152 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 HIP1RO75146 1068 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 XYLBO75191 536 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 DMDP11532 3685 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 CDC25AP30304 524 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 HOXA9P31269 272 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 YARSP54577 528 aaKnown RBP14.45□□□□□ -0.1
RPS28-204ENST00000602140 OSTNP61366 133 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
RPS28-204ENST00000602140 IL17AQ16552 155 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 UPP1Q16831 310 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 ZNF568Q3ZCX4 644 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 KRT79Q5XKE5 535 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 CD300LGQ6UXG3 332 aa14.45□□□□□ -0.1
RPS28-204ENST00000602140 RSPO2Q6UXX9 243 aaPredicted RBP14.45□□□□□ -0.1
RPS28-204ENST00000602140 DAW1Q8N136 415 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms