RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	SF3A1	Q15459	793 aa	Known RBP	5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	DDB1	Q16531	1140 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	LRCH2	Q5VUJ6	765 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015		Q6YL49	198 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	BRINP3	Q76B58	766 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	PLXDC1	Q8IUK5	500 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	EFHB	Q8N7U6	833 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	BEND2	Q8NDZ0	799 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	PIK3C3	Q8NEB9	887 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	NELL1	Q92832	810 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	LRRC59	Q96AG4	307 aa	Known RBP	5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	PODXL2	Q9NZ53	605 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	TRPM5	Q9NZQ8	1165 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	TRPC5	Q9UL62	973 aa	Predicted RBP	5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	NHSL1	Q5SYE7	1610 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	CCDC18	Q5T9S5	1454 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	LRRIQ1	Q96JM4	1722 aa		5.94	□□□□□ -1.46
FARP1-238	ENST00000602015	BLM	P54132	1417 aa	Predicted RBP	5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	ARHGAP31	Q2M1Z3	1444 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	HLA-DOA	P06340	250 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	MGAT1	P26572	445 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	APOBEC3A	P31941	199 aa	Predicted RBP	5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	ATXN1	P54253	815 aa	Known RBP	5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	HNRNPA0	Q13151	305 aa	Known RBP	5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	CREB3L3	Q68CJ9	461 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	PMFBP1	Q8TBY8	1022 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	FERMT2	Q96AC1	680 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	BBC3	Q96PG8	261 aa	Predicted RBP	5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	CPEB1	Q9BZB8	566 aa	Known RBP	5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	ZNF768	Q9H5H4	540 aa	Known RBP	5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	ZMAT4	Q9H898	229 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	SYNPO2L	Q9H987	977 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	AKIP1	Q9NQ31	210 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	COX11	Q9Y6N1	276 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	BCL9L	Q86UU0	1499 aa		5.93	□□□□□ -1.46
FARP1-238	ENST00000602015	CASKIN1	Q8WXD9	1431 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	KDM5A	P29375	1690 aa	Known RBP	5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	KIAA0355	O15063	1070 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	SEC24D	O94855	1032 aa	Predicted RBP	5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	SPATA31D3	P0C874	917 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	ZFP36	P26651	326 aa	Known RBP	5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	IL12RB1	P42701	662 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	CSRP2	Q16527	193 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	GPR158	Q5T848	1215 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	LMBR1L	Q6UX01	489 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	SPATA31D4	Q6ZUB0	917 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	SYNPO	Q8N3V7	929 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	RSAD2	Q8WXG1	361 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	LSM14B	Q9BX40	385 aa	Known RBP	5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	WDR11	Q9BZH6	1224 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	OSBPL2	Q9H1P3	480 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	ZNF644	Q9H582	1327 aa	Predicted RBP	5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	MROH1	Q8NDA8	1641 aa		5.92	□□□□□ -1.46
FARP1-238	ENST00000602015	ATRN	O75882	1429 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	F2	P00734	622 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	HKR1	P10072	659 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	ATP2A2	P16615	1042 aa	Known RBP	5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	ARMC6	Q6NXE6	501 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	CCDC62	Q6P9F0	684 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	GPRIN1	Q7Z2K8	1008 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	GAB3	Q8WWW8	586 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	CAVIN3	Q969G5	261 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	WNT8A	Q9H1J5	351 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	TBX22	Q9Y458	520 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	INSL6	Q9Y581	213 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015	PNPLA6	Q8IY17	1366 aa		5.91	□□□□□ -1.46
FARP1-238	ENST00000602015		B5MCH6	92 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	ELL2	O00472	640 aa	Predicted RBP	5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	NCR1	O76036	304 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	PFKM	P08237	780 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	ATF3	P18847	181 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	SDS	P20132	328 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	MXRA7	P84157	204 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	GUCY1B3	Q02153	619 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	IDI1	Q13907	227 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	BEAN1	Q3B7T3	259 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	ZKSCAN2	Q63HK3	967 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	DEFB132	Q7Z7B7	95 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	GLB1L2	Q8IW92	636 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	NTN5	Q8WTR8	489 aa	Predicted RBP	5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	SLC9A6	Q92581	669 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	SPON1	Q9HCB6	807 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	SYBU	Q9NX95	663 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	ANKFY1	Q9P2R3	1169 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	MSRA	Q9UJ68	235 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	USP18	Q9UMW8	372 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	CHST2	Q9Y4C5	530 aa		5.9	□□□□□ -1.46
FARP1-238	ENST00000602015	PCNT	O95613	3336 aa		5.9	□□□□□ -1.47
FARP1-238	ENST00000602015	CCNB3	Q8WWL7	1395 aa		5.9	□□□□□ -1.47
FARP1-238	ENST00000602015	CHD2	O14647	1828 aa	Known RBP	5.9	□□□□□ -1.47
FARP1-238	ENST00000602015	MAST1	Q9Y2H9	1570 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015		A0A1W2PR48	441 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	LPXN	O60711	386 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	NDUFA10	O95299	355 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	CFB	P00751	764 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	RBP3	P10745	1247 aa		5.89	□□□□□ -1.47
FARP1-238	ENST00000602015	CDK4	P11802	303 aa		5.89	□□□□□ -1.47

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