RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 GPNMBQ14956 572 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 SAFBQ15424 915 aaKnown RBP eCLIP10.48□□□□□ -0.73
FARP1-235ENST00000601656 EPC2Q52LR7 807 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 COBLL1Q53SF7 1204 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 CNKSR3Q6P9H4 555 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 TOGARAM2Q6ZUX3 1019 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 RAB44Q7Z6P3 723 aaPredicted RBP10.48□□□□□ -0.73
FARP1-235ENST00000601656 RPAINQ86UA6 219 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 KIF18BQ86Y91 864 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 FBXO16Q8IX29 292 aaPredicted RBP10.48□□□□□ -0.73
FARP1-235ENST00000601656 CLASRPQ8N2M8 674 aaKnown RBP10.48□□□□□ -0.73
FARP1-235ENST00000601656 ZNF513Q8N8E2 541 aaPredicted RBP10.48□□□□□ -0.73
FARP1-235ENST00000601656 PPP1R14AQ96A00 147 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 TTC17Q96AE7 1141 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 CLIP3Q96DZ5 547 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 FUBP3Q96I24 572 aaKnown RBP eCLIP10.48□□□□□ -0.73
FARP1-235ENST00000601656 NSUN3Q9H649 340 aaKnown RBP10.48□□□□□ -0.73
FARP1-235ENST00000601656 INSL6Q9Y581 213 aa10.48□□□□□ -0.73
FARP1-235ENST00000601656 PRR23AA6NEV1 266 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 F5H6K3 240 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 H3BNC9 293 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 NCK2O43639 380 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 EIF4EBP3O60516 100 aaPredicted RBP10.47□□□□□ -0.73
FARP1-235ENST00000601656 CPT1AP50416 773 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 KLRC3Q07444 240 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 FAPQ12884 760 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 TCTN1Q2MV58 587 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 DUSP28Q4G0W2 176 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 NFRKBQ6P4R8 1299 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 CPA6Q8N4T0 437 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 CCDC155Q8N6L0 562 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 AFAP1L1Q8TED9 768 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 PTPRN2Q92932 1015 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 ELMO3Q96BJ8 720 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 MAGEB10Q96LZ2 347 aaPredicted RBP10.47□□□□□ -0.73
FARP1-235ENST00000601656 SLC6A18Q96N87 628 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 FSD1Q9BTV5 496 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 KLHL25Q9H0H3 589 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 SLC38A10Q9HBR0 1119 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 APEX2Q9UBZ4 518 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 GIT1Q9Y2X7 761 aa10.47□□□□□ -0.73
FARP1-235ENST00000601656 TCRBV16S1A1N1A0A5B0 115 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 FAM181BA6NEQ2 426 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 PGRP06401 933 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 PF4V1P10720 104 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 EIF2AK2P19525 551 aaKnown RBP10.46□□□□□ -0.73
FARP1-235ENST00000601656 DLX2Q07687 328 aaPredicted RBP10.46□□□□□ -0.73
FARP1-235ENST00000601656 UBAP2LQ14157 1087 aaKnown RBP10.46□□□□□ -0.73
FARP1-235ENST00000601656 PTGISQ16647 500 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 INAVAQ3KP66 663 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 C6orf118Q5T5N4 469 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 TMEM192Q8IY95 271 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 CAGE1Q8TC20 777 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 SAMD11Q96NU1 681 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 MTA3Q9BTC8 594 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 SOX17Q9H6I2 414 aaPredicted RBP10.46□□□□□ -0.73
FARP1-235ENST00000601656 ACAD9Q9H845 621 aa10.46□□□□□ -0.73
FARP1-235ENST00000601656 A1CFQ9NQ94 594 aaKnown RBP10.46□□□□□ -0.73
FARP1-235ENST00000601656 NLRC5Q86WI3 1866 aa10.46□□□□□ -0.74
FARP1-235ENST00000601656 MICAL3Q7RTP6 2002 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 CYP2D7A0A087X1C5 515 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 H3BM21 787 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 NBNO60934 754 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 CXCL10P02778 98 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 TP53P04637 393 aaPredicted RBP10.45□□□□□ -0.74
FARP1-235ENST00000601656 THBS1P07996 1170 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 MYBL2P10244 700 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 RECQLP46063 649 aaPredicted RBP10.45□□□□□ -0.74
FARP1-235ENST00000601656 OAZ1P54368 228 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 SIGLEC14Q08ET2 396 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 SMAD4Q13485 552 aaKnown RBP10.45□□□□□ -0.74
FARP1-235ENST00000601656 SLC9C2Q5TAH2 1124 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 LRRC8DQ7L1W4 858 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 EPM2AIP1Q7L775 607 aaPredicted RBP10.45□□□□□ -0.74
FARP1-235ENST00000601656 FCHSD1Q86WN1 690 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 ANKRD42Q8N9B4 389 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 TEX19Q8NA77 164 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 BVESQ8NE79 360 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 GJA10Q969M2 543 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 PLCD4Q9BRC7 762 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 HERPUD2Q9BSE4 406 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 WDR11Q9BZH6 1224 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 LRRCC1Q9C099 1032 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 DCTPP1Q9H773 170 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 VTA1Q9NP79 307 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 JADE2Q9NQC1 790 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 MAN1C1Q9NR34 630 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 HCN2Q9UL51 889 aa10.45□□□□□ -0.74
FARP1-235ENST00000601656 MED19A0JLT2 244 aaPredicted RBP10.44□□□□□ -0.74
FARP1-235ENST00000601656 M0R2C6 588 aa10.44□□□□□ -0.74
FARP1-235ENST00000601656 PRKAB2O43741 272 aa10.44□□□□□ -0.74
FARP1-235ENST00000601656 NDUFB10O96000 172 aa10.44□□□□□ -0.74
FARP1-235ENST00000601656 LPOP22079 712 aaPredicted RBP10.44□□□□□ -0.74
FARP1-235ENST00000601656 SERPINB3P29508 390 aa10.44□□□□□ -0.74
FARP1-235ENST00000601656 NBL1P41271 181 aa10.44□□□□□ -0.74
FARP1-235ENST00000601656 YARSP54577 528 aaKnown RBP10.44□□□□□ -0.74
FARP1-235ENST00000601656 HTRA4P83105 476 aaPredicted RBP10.44□□□□□ -0.74
FARP1-235ENST00000601656 GRM3Q14832 879 aa10.44□□□□□ -0.74
FARP1-235ENST00000601656 KRT72Q14CN4 511 aa10.44□□□□□ -0.74
FARP1-235ENST00000601656 SART3Q15020 963 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms