RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 DNAJB3Q8WWF6 145 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 FBXL18Q96ME1 805 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 GLT1D1Q96MS3 346 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 ALS2CR12Q96Q35 445 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 PPP1R16BQ96T49 567 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 ACO2Q99798 780 aaKnown RBP12.66□□□□□ -0.38
VRK3-223ENST00000601341 GCOM2Q9BZD3 368 aaPredicted RBP12.66□□□□□ -0.38
VRK3-223ENST00000601341 LACRTQ9GZZ8 138 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 UNC93B1Q9H1C4 597 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 EPC1Q9H2F5 836 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 ADAMTS10Q9H324 1103 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 MINDY3Q9H8M7 445 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 MED4Q9NPJ6 270 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 ARHGAP20Q9P2F6 1191 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 RNF14Q9UBS8 474 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 PCDHA13Q9Y5I0 950 aa12.66□□□□□ -0.38
VRK3-223ENST00000601341 GPR32O75388 356 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 LDHAP00338 332 aaKnown RBP12.65□□□□□ -0.38
VRK3-223ENST00000601341 ATP1A1P05023 1023 aaKnown RBP12.65□□□□□ -0.38
VRK3-223ENST00000601341 ANXA13P27216 316 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 MATR3P43243 847 aaKnown RBP eCLIP12.65□□□□□ -0.38
VRK3-223ENST00000601341 KCNH2Q12809 1159 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 SNRNP35Q16560 246 aaKnown RBP12.65□□□□□ -0.38
VRK3-223ENST00000601341 TCERG1LQ5VWI1 586 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 GDF6Q6KF10 455 aaPredicted RBP12.65□□□□□ -0.38
VRK3-223ENST00000601341 CCDC70Q6NSX1 233 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 PDXDC1Q6P996 788 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 TSHZ1Q6ZSZ6 1077 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 RSPH3Q86UC2 560 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 GPD1LQ8N335 351 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 EXOC4Q96A65 974 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 TCHPQ9BT92 498 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 PAK6Q9NQU5 681 aaPredicted RBP12.65□□□□□ -0.38
VRK3-223ENST00000601341 ANKFY1Q9P2R3 1169 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 TRIM10Q9UDY6 481 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 AGO2Q9UKV8 859 aaKnown RBP12.65□□□□□ -0.38
VRK3-223ENST00000601341 USP20Q9Y2K6 914 aa12.65□□□□□ -0.38
VRK3-223ENST00000601341 SCN10AQ9Y5Y9 1956 aa12.65□□□□□ -0.39
VRK3-223ENST00000601341 KAT6AQ92794 2004 aa12.65□□□□□ -0.39
VRK3-223ENST00000601341 A0A0B4J269 797 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 GOLGA8IPA6NC78 632 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 GOLGA8JA6NMD2 632 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 KBTBD13C9JR72 458 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 EXTL3O43909 919 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 EDN1P05305 212 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 IQCF3P0C7M6 154 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 HSPA8P11142 646 aaKnown RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 OAS2P29728 719 aaKnown RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 KLK7P49862 253 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 PTPN11Q06124 597 aaPredicted RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 TMEM62Q0P6H9 643 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 BFSP1Q12934 665 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 ITGA7Q13683 1181 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 PCBP1Q15365 356 aaKnown RBP eCLIP12.64□□□□□ -0.39
VRK3-223ENST00000601341 TMEM132AQ24JP5 1023 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 CTU1Q7Z7A3 348 aaKnown RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 USP37Q86T82 979 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 SLC35C1Q96A29 364 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 SAAL1Q96ER3 474 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 MSTO1Q9BUK6 570 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 DEF6Q9H4E7 631 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 MMRN2Q9H8L6 949 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 SNX12Q9UMY4 172 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 GINS2Q9Y248 185 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 GRIN2DO15399 1336 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 RCCD1A6NED2 376 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 ZNF233A6NK53 670 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 TTLL13PA6NNM8 815 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 ZNF263O14978 683 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 AKR1B10O60218 316 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 CSDE1O75534 798 aaKnown RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 ERLIN2O94905 339 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 CLSTN1O94985 981 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 SERPING1P05155 500 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 CCL5P13501 91 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 VSNL1P62760 191 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 MCL1Q07820 350 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 C10orf76Q5T2E6 689 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 ATF7IP2Q5U623 682 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 MPZL3Q6UWV2 235 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 CACNA2D4Q7Z3S7 1137 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 SERINC5Q86VE9 423 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 CBWD2Q8IUF1 395 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 MMGT1Q8N4V1 131 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 NOA1Q8NC60 698 aaKnown RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 ZSWIM2Q8NEG5 633 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 ZBTB45Q96K62 511 aaPredicted RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 FAM213AQ9BRX8 229 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 RNF208Q9H0X6 261 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 ABCB6Q9NP58 842 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 PLCB1Q9NQ66 1216 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 FAM207AQ9NSI2 230 aaPredicted RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 AIPL1Q9NZN9 384 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.64□□□□□ -0.39
VRK3-223ENST00000601341 FBXL5Q9UKA1 691 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 TNFSF13BQ9Y275 285 aa12.64□□□□□ -0.39
VRK3-223ENST00000601341 EVPLQ92817 2033 aa12.63□□□□□ -0.39
VRK3-223ENST00000601341 CNTNAP2Q9UHC6 1331 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms