RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 HCFC1R1Q9NWW0 138 aa18.58■□□□□ 0.56
USE1-208ENST00000600970 PCDHGA2Q9Y5H1 932 aa18.58■□□□□ 0.56
USE1-208ENST00000600970 CYP46A1Q9Y6A2 500 aa18.58■□□□□ 0.56
USE1-208ENST00000600970 PTGESO14684 152 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 POU2F2P09086 479 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 RARRES1P49788 294 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 ZBTB41Q5SVQ8 909 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 NPAS3Q8IXF0 933 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 ZBTB44Q8NCP5 570 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 SLC7A14Q8TBB6 771 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 ATRIPQ8WXE1 791 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 CNTNAP3BQ96NU0 1288 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 CNTNAP3Q9BZ76 1288 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 CXCL16Q9H2A7 254 aa18.57■□□□□ 0.56
USE1-208ENST00000600970 DNMT3BQ9UBC3 853 aaKnown RBP18.57■□□□□ 0.56
USE1-208ENST00000600970 FAM205CA6NFA0 338 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 REC8O95072 547 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 THP07101 528 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 TARSP26639 723 aaKnown RBP18.56■□□□□ 0.56
USE1-208ENST00000600970 RAB33AQ14088 237 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 NAB2Q15742 525 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 UVSSAQ2YD98 709 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 PDXDC1Q6P996 788 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 GPR161Q8N6U8 529 aaKnown RBP18.56■□□□□ 0.56
USE1-208ENST00000600970 CLDN23Q96B33 292 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 ZSCAN32Q9NX65 697 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 SNTG2Q9NY99 539 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 PCDHA12Q9UN75 941 aa18.56■□□□□ 0.56
USE1-208ENST00000600970 A0A087WWV3 80 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 LRRIQ4A6NIV6 560 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 TTLL13PA6NNM8 815 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 DTNBO60941 627 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 LILRB5O75023 590 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 XBP1P17861 261 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 SDHBP21912 280 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 OR1D2P34982 312 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 ATXN1P54253 815 aaKnown RBP18.55■□□□□ 0.56
USE1-208ENST00000600970 ELAVL2Q12926 359 aaKnown RBP18.55■□□□□ 0.56
USE1-208ENST00000600970 PABPC1LQ4VXU2 614 aaKnown RBP18.55■□□□□ 0.56
USE1-208ENST00000600970 TPRG1Q6ZUI0 275 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 PIGOQ8TEQ8 1089 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 ING5Q8WYH8 240 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 NELL1Q92832 810 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 PRIMPOLQ96LW4 560 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 CCDC43Q96MW1 224 aaKnown RBP18.55■□□□□ 0.56
USE1-208ENST00000600970 EPC1Q9H2F5 836 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 FZD8Q9H461 694 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 GPRC5CQ9NQ84 441 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 PRMT7Q9NVM4 692 aaPredicted RBP18.55■□□□□ 0.56
USE1-208ENST00000600970 KCNH3Q9ULD8 1083 aa18.55■□□□□ 0.56
USE1-208ENST00000600970 SMG5Q9UPR3 1016 aaKnown RBP18.55■□□□□ 0.56
USE1-208ENST00000600970 STK36Q9NRP7 1315 aa18.54■□□□□ 0.56
USE1-208ENST00000600970 USO1O60763 962 aaKnown RBP18.54■□□□□ 0.56
USE1-208ENST00000600970 RECQL4O94761 1208 aa18.54■□□□□ 0.56
USE1-208ENST00000600970 RPS9P46781 194 aaKnown RBP18.54■□□□□ 0.56
USE1-208ENST00000600970 SCRN1Q12765 414 aa18.54■□□□□ 0.56
USE1-208ENST00000600970 FAM187BQ17R55 369 aa18.54■□□□□ 0.56
USE1-208ENST00000600970 TSSK4Q6SA08 328 aa18.54■□□□□ 0.56
USE1-208ENST00000600970 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.54■□□□□ 0.56
USE1-208ENST00000600970 MAEAQ7L5Y9 396 aa18.54■□□□□ 0.56
USE1-208ENST00000600970 SECISBP2LQ93073 1101 aaKnown RBP18.54■□□□□ 0.56
USE1-208ENST00000600970 NELL2Q99435 816 aa18.54■□□□□ 0.56
USE1-208ENST00000600970 PLA2G2FQ9BZM2 168 aa18.54■□□□□ 0.56
USE1-208ENST00000600970 PDZD7Q9H5P4 517 aa18.54■□□□□ 0.56
USE1-208ENST00000600970 N4BP3O15049 544 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 NCAM2O15394 837 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 ECI2O75521 394 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 KRT37O76014 449 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 CDKL5O76039 1030 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 FGFR3P22607 806 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 NR5A1Q13285 461 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 FZD5Q13467 585 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 CDCA2Q69YH5 1023 aaPredicted RBP18.53■□□□□ 0.56
USE1-208ENST00000600970 POTEHQ6S545 545 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 RTL10Q7L3V2 364 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 MCRS1Q96EZ8 462 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 TM6SF1Q9BZW5 370 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 TTC12Q9H892 705 aaPredicted RBP18.53■□□□□ 0.56
USE1-208ENST00000600970 PRMT8Q9NR22 394 aaPredicted RBP18.53■□□□□ 0.56
USE1-208ENST00000600970 MTRRQ9UBK8 725 aa18.53■□□□□ 0.56
USE1-208ENST00000600970 SHISA7A6NL88 538 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 RHOP08100 348 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 XRCC6P12956 609 aaKnown RBP eCLIP18.52■□□□□ 0.56
USE1-208ENST00000600970 IGFBP6P24592 240 aaPredicted RBP18.52■□□□□ 0.56
USE1-208ENST00000600970 CALCRLQ16602 461 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 SLC5A9Q2M3M2 681 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 ZNF852Q6ZMS4 543 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 NOSTRINQ8IVI9 506 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 ZBTB8OSQ8IWT0 167 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 TNFRSF25Q93038 417 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 HEBP1Q9NRV9 189 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 MRPS23Q9Y3D9 190 aaKnown RBP18.52■□□□□ 0.56
USE1-208ENST00000600970 CDY1Q9Y6F8 540 aa18.52■□□□□ 0.56
USE1-208ENST00000600970 PRR5-ARHGAP8B1AHC4 643 aa18.51■□□□□ 0.55
USE1-208ENST00000600970 TMEM189-UBE2V1I3L0A0 370 aa18.51■□□□□ 0.55
USE1-208ENST00000600970 TBC1D4O60343 1298 aa18.51■□□□□ 0.55
USE1-208ENST00000600970 TGM1P22735 817 aa18.51■□□□□ 0.55
USE1-208ENST00000600970 TXKP42681 527 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms