RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 MCCD1P59942 119 aaPredicted RBP12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 ZP2Q05996 745 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 NFX1Q12986 1120 aaKnown RBP12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 NOLC1Q14978 699 aaKnown RBP eCLIP12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 TTI2Q6NXR4 508 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 SLC27A1Q6PCB7 646 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 LRSAM1Q6UWE0 723 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 NELFBQ8WX92 580 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 TOP1MTQ969P6 601 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 BICD1Q96G01 975 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 FBXL18Q96ME1 805 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 ADPGKQ9BRR6 497 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 NAT10Q9H0A0 1025 aaKnown RBP12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 RGS18Q9NS28 235 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 C1orf112Q9NSG2 853 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 MAPK8IP1Q9UQF2 711 aa12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 PIN4Q9Y237 131 aaKnown RBP12.71□□□□□ -0.37
CHMP2A-207ENST00000600804 ZDBF2Q9HCK1 2354 aa12.71□□□□□ -0.38
CHMP2A-207ENST00000600804 A0A0U1RQF3 1178 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 C19orf67A6NJJ6 358 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 ANKRD63C9JTQ0 380 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 MAPK13O15264 365 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 FAM189A1O60320 539 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 UPP2O95045 317 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 LDHAP00338 332 aaKnown RBP12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 AMHP03971 560 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 RPL13P26373 211 aaKnown RBP12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 FAM189BP81408 668 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 FKBP3Q00688 224 aaKnown RBP12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 ENPEPQ07075 957 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 DLX2Q07687 328 aaPredicted RBP12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 GPM6BQ13491 265 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 UBXN11Q5T124 520 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 MRPL10Q7Z7H8 261 aaKnown RBP12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 NELFCDQ8IXH7 590 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 ENOX1Q8TC92 643 aaKnown RBP12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 RSPH1Q8WYR4 309 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 PABPC5Q96DU9 382 aaKnown RBP12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 TSG101Q99816 390 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 CDT1Q9H211 546 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 RC3H2Q9HBD1 1191 aaKnown RBP12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 KIAA1586Q9HCI6 787 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 TRIP11Q15643 1979 aa12.7□□□□□ -0.38
CHMP2A-207ENST00000600804 C9IYK1 514 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 IKBKBO14920 756 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 OGTO15294 1046 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 ZNF568Q3ZCX4 644 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 EEF1DP3Q658K8 133 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 ANKRD40Q6AI12 368 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 SLC24A5Q71RS6 500 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 TMEM192Q8IY95 271 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 POMGNT1Q8WZA1 660 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 CPB2Q96IY4 423 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 CEP63Q96MT8 703 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 MED15Q96RN5 788 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 MKNK1Q9BUB5 465 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 HAPLN2Q9GZV7 340 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 ELAC1Q9H777 363 aaKnown RBP12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 HSPBP1Q9NZL4 362 aa12.69□□□□□ -0.38
CHMP2A-207ENST00000600804 TISP43B9A030 160 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 ENPP3O14638 875 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 CETN3O15182 167 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 EXTL3O43909 919 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 MGEA5O60502 916 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 FGFR1OPO95684 399 aaKnown RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 EOMESO95936 686 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 NR3C1P04150 777 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 ADRB2P07550 413 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 NR2F2P24468 414 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 GTF2F1P35269 517 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 IRS1P35568 1242 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 GRM5P41594 1212 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 PMS1P54277 932 aaKnown RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 CTC1Q2NKJ3 1217 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 ANO6Q4KMQ2 910 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 TIGD5Q53EQ6 642 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 TWF2Q6IBS0 349 aaKnown RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 KLHL10Q6JEL2 608 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 ARMCX5Q6P1M9 558 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 C11orf57Q6ZUT1 292 aaPredicted RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 ZNF598Q86UK7 904 aaKnown RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 RTN4RL1Q86UN2 441 aaPredicted RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 CRIPAKQ8N1N5 446 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 XXYLT1Q8NBI6 393 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 NOC3LQ8WTT2 800 aaKnown RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 LINC01599Q8WXQ3 324 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 ZBTB45Q96K62 511 aaPredicted RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 SAMD11Q96NU1 681 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 TSPAN18Q96SJ8 248 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 DUSP9Q99956 384 aaKnown RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 ADAM2Q99965 735 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 CBWD1Q9BRT8 395 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 TCHPQ9BT92 498 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 DNAJC25Q9H1X3 360 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 NSUN3Q9H649 340 aaKnown RBP12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 FAM105AQ9NUU6 356 aa12.68□□□□□ -0.38
CHMP2A-207ENST00000600804 AGO2Q9UKV8 859 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms