RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 TMEM161BQ8NDZ6 487 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 RIN2Q8WYP3 895 aaPredicted RBP15.7■□□□□ 0.1
IRF3-224ENST00000599680 B3GALT6Q96L58 329 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 ACAP3Q96P50 834 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 PAAF1Q9BRP4 392 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 GPR62Q9BZJ7 368 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 SFXN1Q9H9B4 322 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.7■□□□□ 0.1
IRF3-224ENST00000599680 CACNG4Q9UBN1 327 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 MUTYHQ9UIF7 546 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 MTMR6Q9Y217 621 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 MYO10Q9HD67 2058 aa15.7■□□□□ 0.1
IRF3-224ENST00000599680 K7ENM7 598 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 TEX28O15482 410 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 LILRB3O75022 631 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 KIF4AO95239 1232 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 GLUD1P00367 558 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 WEE2P0C1S8 567 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 NCKAP1LP55160 1127 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 ELAVL2Q12926 359 aaKnown RBP15.69■□□□□ 0.1
IRF3-224ENST00000599680 NOLC1Q14978 699 aaKnown RBP eCLIP15.69■□□□□ 0.1
IRF3-224ENST00000599680 PTPAQ15257 358 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 ARSHQ5FYA8 562 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 SPECC1Q5M775 1068 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 KIAA0319Q5VV43 1072 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 TMC5Q6UXY8 1006 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 HAUS6Q7Z4H7 955 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 CEP57Q86XR8 500 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 GLYCTKQ8IVS8 523 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 RNF168Q8IYW5 571 aaPredicted RBP15.69■□□□□ 0.1
IRF3-224ENST00000599680 CEP120Q8N960 986 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 SNX21Q969T3 373 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 EPSTI1Q96J88 318 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 UROC1Q96N76 676 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 LRFN3Q9BTN0 628 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 CCSER1Q9C0I3 900 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 PARVGQ9HBI0 331 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 MAN1C1Q9NR34 630 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 BLOC1S4Q9NUP1 217 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 SLC38A7Q9NVC3 462 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 SRPRBQ9Y5M8 271 aaKnown RBP15.69■□□□□ 0.1
IRF3-224ENST00000599680 ANK1P16157 1881 aa15.69■□□□□ 0.1
IRF3-224ENST00000599680 CLDN3O15551 220 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 TOM1L1O75674 476 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 EFEMP2O95967 443 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 SCP2P22307 547 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 LIG4P49917 911 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 STK38Q15208 465 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 NAB2Q15742 525 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 HERC4Q5GLZ8 1057 aaPredicted RBP15.68■□□□□ 0.1
IRF3-224ENST00000599680 FAM171A1Q5VUB5 890 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 RRAGBQ5VZM2 374 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 PDXDC1Q6P996 788 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 ZPBP2Q6X784 338 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 PALB2Q86YC2 1186 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 GPR65Q8IYL9 337 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
IRF3-224ENST00000599680 PPP1R10Q96QC0 940 aaKnown RBP15.68■□□□□ 0.1
IRF3-224ENST00000599680 TTPALQ9BTX7 342 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 CXCL16Q9H2A7 254 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 POMKQ9H5K3 350 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 RXFP1Q9HBX9 757 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 PTPRHQ9HD43 1115 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 CHST7Q9NS84 486 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 STK17AQ9UEE5 414 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 CDH22Q9UJ99 828 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 FBXO2Q9UK22 296 aaPredicted RBP15.68■□□□□ 0.1
IRF3-224ENST00000599680 TCHHQ07283 1943 aa15.68■□□□□ 0.1
IRF3-224ENST00000599680 SMIM28A0A1B0GU29 152 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 HNRNPDLO14979 420 aaKnown RBP15.67■□□□□ 0.1
IRF3-224ENST00000599680 TRAPPC3O43617 180 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 TRAK2O60296 914 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 PROZP22891 400 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 ABCD1P33897 745 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 DDIT3P35638 169 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 KANK3Q6NY19 840 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 DCLRE1AQ6PJP8 1040 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 ZBTB45Q96K62 511 aaPredicted RBP15.67■□□□□ 0.1
IRF3-224ENST00000599680 SNX27Q96L92 541 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 ZNF396Q96N95 335 aaPredicted RBP15.67■□□□□ 0.1
IRF3-224ENST00000599680 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 USP28Q96RU2 1077 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 FNIP2Q9P278 1114 aa15.67■□□□□ 0.1
IRF3-224ENST00000599680 TRIOO75962 3097 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 PRR33A8MZF0 331 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 B3GAT3O94766 335 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 BRD1O95696 1058 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 SPATA31D3P0C874 917 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 MYBP10242 640 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 RPL17P18621 184 aaKnown RBP15.66■□□□□ 0.1
IRF3-224ENST00000599680 CLCNKBP51801 687 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 SLC39A14Q15043 492 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 PSMD5Q16401 504 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 PRSS55Q6UWB4 352 aaPredicted RBP15.66■□□□□ 0.1
IRF3-224ENST00000599680 SPATA31D4Q6ZUB0 917 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 USP49Q70CQ1 688 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 TDRD5Q8NAT2 981 aaKnown RBP15.66■□□□□ 0.1
IRF3-224ENST00000599680 LRRC15Q8TF66 581 aa15.66■□□□□ 0.1
IRF3-224ENST00000599680 DDX27Q96GQ7 796 aaKnown RBP15.66■□□□□ 0.1
IRF3-224ENST00000599680 GOLGA2P5Q9HBQ8 144 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms