RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 PSAPL1Q6NUJ1 521 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 FAM173BQ6P4H8 233 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 CEP68Q76N32 757 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 ZNF710Q8N1W2 664 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 FAM160A2Q8N612 972 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 TBCKQ8TEA7 893 aa15.43■□□□□ 0.06
SHKBP1-218ENST00000598907 SRRM3A6NNA2 597 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 FAM86B1E9PN63 330 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 FOXD2O60548 495 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 KCNK5O95279 499 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 PAPLNO95428 1278 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 FAM86B2P0C5J1 330 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 CCR3P51677 355 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 USP11P51784 963 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 INF2Q27J81 1249 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 RILPL1Q5EBL4 403 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 LIN9Q5TKA1 542 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 LRSAM1Q6UWE0 723 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 CLEC17AQ6ZS10 378 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 RNF168Q8IYW5 571 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 ZNF577Q9BSK1 485 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 ATP6V1DQ9Y5K8 247 aa15.42■□□□□ 0.06
SHKBP1-218ENST00000598907 SHISA7A6NL88 538 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 WNT7AO00755 349 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 ZNF862O60290 1169 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 ZNF623O75123 536 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 CIITAP33076 1130 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 LIMK1P53667 647 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 PPM1LQ5SGD2 360 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 STPG1Q5TH74 334 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 ATL3Q6DD88 541 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 ZNF746Q6NUN9 644 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 NEK8Q86SG6 692 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 NPAS3Q8IXF0 933 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 KDF1Q8NAX2 398 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 NLRP4Q96MN2 994 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 PLA2G2FQ9BZM2 168 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 HCFC1R1Q9NWW0 138 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 KANSL3Q9P2N6 904 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 PCDHA10Q9Y5I2 948 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 CNTNAP2Q9UHC6 1331 aa15.41■□□□□ 0.06
SHKBP1-218ENST00000598907 CYP3A7-CYP3A51PA0A087WV96 503 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 TM4SF5O14894 197 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 AXIN1O15169 862 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 C8AP07357 584 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 CYP3A7P24462 503 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 GRM2Q14416 872 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 UGCGQ16739 394 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 LILRA6Q6PI73 481 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 MOXD1Q6UVY6 613 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 PRSS55Q6UWB4 352 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 RHPN2Q8IUC4 686 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 KSR1Q8IVT5 923 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 SMAP1Q8IYB5 467 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 COLGALT2Q8IYK4 626 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 ZCCHC14Q8WYQ9 949 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 MBOAT7Q96N66 472 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 SH2D3AQ9BRG2 576 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 ARRDC1-AS1Q9H2J1 176 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 SMOC1Q9H4F8 434 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 LMAN1LQ9HAT1 526 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 FBXW11Q9UKB1 542 aa15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 NOL7Q9UMY1 257 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-218ENST00000598907 GREB1Q4ZG55 1949 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 WDR81Q562E7 1941 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 IGLV3-22A0A075B6J6 115 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 TMEM150BA6NC51 233 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 MLH1P40692 756 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 CXCL12P48061 93 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 NOVA1P51513 510 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 DNM1Q05193 864 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 ORC2Q13416 577 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 MTERF2Q49AM1 385 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 TTC38Q5R3I4 469 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 PPP4R3AQ6IN85 833 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 FUT10Q6P4F1 479 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 NIPA1Q7RTP0 329 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 RABGGTAQ92696 567 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 ZNF396Q96N95 335 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 USP28Q96RU2 1077 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 ADAM33Q9BZ11 813 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 GPR62Q9BZJ7 368 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 NRBP2Q9NSY0 501 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 SEPT9Q9UHD8 586 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 PCDHB6Q9Y5E3 794 aa15.39■□□□□ 0.05
SHKBP1-218ENST00000598907 GIPC1O14908 333 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 CHMP2AO43633 222 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 XYLBO75191 536 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 EFEMP2O95967 443 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 TOP3BO95985 862 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 NASPP49321 788 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 SCNN1GP51170 649 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 ZNF252P-AS1Q0IIN9 211 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 USP41Q3LFD5 358 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 ZNF687Q8N1G0 1237 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 C4orf32Q8N8J7 132 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 MCRS1Q96EZ8 462 aa15.38■□□□□ 0.05
SHKBP1-218ENST00000598907 NAP1L4Q99733 375 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms