RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 MUTYHQ9UIF7 546 aa12.8□□□□□ -0.36
SYMPK-207ENST00000596824 KCNG1Q9UIX4 513 aa12.8□□□□□ -0.36
SYMPK-207ENST00000596824 ODF2LQ9ULJ1 636 aa12.8□□□□□ -0.36
SYMPK-207ENST00000596824 SF3B1O75533 1304 aaKnown RBP eCLIP12.8□□□□□ -0.36
SYMPK-207ENST00000596824 TRIOO75962 3097 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 STX6O43752 255 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 TADA2AO75478 443 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 ADH1AP07327 375 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 WEE2P0C1S8 567 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 MARCKSP29966 332 aaPredicted RBP12.79□□□□□ -0.36
SYMPK-207ENST00000596824 MTHFRP42898 656 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 ZNF131P52739 623 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 SMTNP53814 917 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 OSTNP61366 133 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 STRN3Q13033 797 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 DHX8Q14562 1220 aaKnown RBP12.79□□□□□ -0.36
SYMPK-207ENST00000596824 USP41Q3LFD5 358 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 XKR4Q5GH76 650 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 GLRA4Q5JXX5 417 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 KIAA1841Q6NSI8 718 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 ALKAL1Q6UXT8 129 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 GPR65Q8IYL9 337 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 RASSF8Q8NHQ8 419 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 LARP4BQ92615 738 aaKnown RBP12.79□□□□□ -0.36
SYMPK-207ENST00000596824 KCNN1Q92952 543 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 EPSTI1Q96J88 318 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 NECTIN4Q96NY8 510 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 CCDC94Q9BW85 323 aaPredicted RBP12.79□□□□□ -0.36
SYMPK-207ENST00000596824 SFXN1Q9H9B4 322 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 LARSQ9P2J5 1176 aaKnown RBP12.79□□□□□ -0.36
SYMPK-207ENST00000596824 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
SYMPK-207ENST00000596824 GTF3C3Q9Y5Q9 886 aa12.79□□□□□ -0.36
SYMPK-207ENST00000596824 MORC2Q9Y6X9 1032 aaPredicted RBP12.79□□□□□ -0.36
SYMPK-207ENST00000596824 SMIM28A0A1B0GU29 152 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 TMEM189-UBE2V1I3L0A0 370 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 MEFVO15553 781 aaPredicted RBP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 YARSP54577 528 aaKnown RBP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 CEBPZQ03701 1054 aaKnown RBP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 SOX4Q06945 474 aaPredicted RBP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 NOLC1Q14978 699 aaKnown RBP eCLIP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 SPECC1Q5M775 1068 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 RTP2Q5QGT7 225 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 ZPBP2Q6X784 338 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 HAUS6Q7Z4H7 955 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 RIN2Q8WYP3 895 aaPredicted RBP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 SNX27Q96L92 541 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 RIPOR3Q96MK2 946 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 CLIC6Q96NY7 704 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 USP28Q96RU2 1077 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 MAN1C1Q9NR34 630 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 TOPORSQ9NS56 1045 aaPredicted RBP12.78□□□□□ -0.36
SYMPK-207ENST00000596824 FNIP2Q9P278 1114 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 ANKFY1Q9P2R3 1169 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 RAPGEFL1Q9UHV5 662 aa12.78□□□□□ -0.36
SYMPK-207ENST00000596824 PRR33A8MZF0 331 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 H0YCG3 227 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 TOM1L1O75674 476 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 FAM13AO94988 1023 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 GLUD1P00367 558 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 HARSP12081 509 aaKnown RBP12.77□□□□□ -0.37
SYMPK-207ENST00000596824 SP100P23497 879 aaPredicted RBP12.77□□□□□ -0.37
SYMPK-207ENST00000596824 CLCNKBP51801 687 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 CREMQ03060 361 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 FAM171A1Q5VUB5 890 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 PRSS55Q6UWB4 352 aaPredicted RBP12.77□□□□□ -0.37
SYMPK-207ENST00000596824 CD300LGQ6UXG3 332 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 TMC5Q6UXY8 1006 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 GPR149Q86SP6 731 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 UROC1Q96N76 676 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 ZMAT2Q96NC0 199 aaKnown RBP12.77□□□□□ -0.37
SYMPK-207ENST00000596824 ACAP3Q96P50 834 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 TCHPQ9BT92 498 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 HAPLN2Q9GZV7 340 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 PARVGQ9HBI0 331 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 GOLGA2P5Q9HBQ8 144 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 CNTN3Q9P232 1028 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 STK17AQ9UEE5 414 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 NR2E1Q9Y466 385 aa12.77□□□□□ -0.37
SYMPK-207ENST00000596824 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 C2CD4DB7Z1M9 353 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 K7ENM7 598 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 C1RP00736 705 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 KRT18P05783 430 aaKnown RBP12.76□□□□□ -0.37
SYMPK-207ENST00000596824 KCNE1P15382 129 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
SYMPK-207ENST00000596824 IGFBP6P24592 240 aaPredicted RBP12.76□□□□□ -0.37
SYMPK-207ENST00000596824 DDIT3P35638 169 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 NASPP49321 788 aaPredicted RBP12.76□□□□□ -0.37
SYMPK-207ENST00000596824 MCL1Q07820 350 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 ELAVL2Q12926 359 aaKnown RBP12.76□□□□□ -0.37
SYMPK-207ENST00000596824 SLC39A14Q15043 492 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 UPP1Q16831 310 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 SEZ6Q53EL9 994 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 ATAT1Q5SQI0 421 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 GLYCTKQ8IVS8 523 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 HSCBQ8IWL3 235 aa12.76□□□□□ -0.37
SYMPK-207ENST00000596824 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms