RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 C17orf80Q9BSJ5 609 aa11.53□□□□□ -0.56
LIG1-210ENST00000596332 MSTO1Q9BUK6 570 aa11.53□□□□□ -0.56
LIG1-210ENST00000596332 CACNG4Q9UBN1 327 aa11.53□□□□□ -0.56
LIG1-210ENST00000596332 PARP2Q9UGN5 583 aa11.53□□□□□ -0.56
LIG1-210ENST00000596332 HOOK1Q9UJC3 728 aaKnown RBP11.53□□□□□ -0.56
LIG1-210ENST00000596332 LRFN2Q9ULH4 789 aa11.53□□□□□ -0.56
LIG1-210ENST00000596332 PTPRJQ12913 1337 aa11.53□□□□□ -0.56
LIG1-210ENST00000596332 CDH23Q9H251 3354 aa11.52□□□□□ -0.56
LIG1-210ENST00000596332 LPXNO60711 386 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 POMCP01189 267 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 CCNE1P24864 410 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 NLRP12P59046 1061 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 ERVK-21P61565 698 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 SPAG1Q07617 926 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 CAMK1Q14012 370 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 PAN2Q504Q3 1202 aaKnown RBP11.52□□□□□ -0.57
LIG1-210ENST00000596332 CCDC183Q5T5S1 534 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 CAVIN1Q6NZI2 390 aaKnown RBP11.52□□□□□ -0.57
LIG1-210ENST00000596332 STXBP4Q6ZWJ1 553 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 IRF2BP1Q8IU81 584 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 EFCAB13Q8IY85 973 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 ZNF516Q92618 1163 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 CCDC34Q96HJ3 373 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 MFSD14AQ96MC6 490 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 YME1L1Q96TA2 773 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 FAM213AQ9BRX8 229 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 VN1R3Q9BXE9 311 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 PLEKHA5Q9HAU0 1116 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 UBN1Q9NPG3 1134 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 CGNQ9P2M7 1197 aaKnown RBP11.52□□□□□ -0.57
LIG1-210ENST00000596332 TRANK1O15050 2925 aa11.52□□□□□ -0.57
LIG1-210ENST00000596332 C5orf67F2Z3F1 127 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 AKAP3O75969 853 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 NR3C1P04150 777 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 GALTP07902 379 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 BMPR1AP36894 532 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 PBX3P40426 434 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 SLC11A1P49279 550 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 CLDN10P78369 228 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 BTG3Q14201 252 aaPredicted RBP11.51□□□□□ -0.57
LIG1-210ENST00000596332 MYBPC2Q14324 1141 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 EDRF1Q3B7T1 1238 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 GLRA4Q5JXX5 417 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 ARMCX5Q6P1M9 558 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 FOXR2Q6PJQ5 311 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 GLB1LQ6UWU2 654 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 BRSK2Q8IWQ3 736 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 GPD1LQ8N335 351 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 P2RX5Q93086 422 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 CCDC47Q96A33 483 aaKnown RBP11.51□□□□□ -0.57
LIG1-210ENST00000596332 C18orf25Q96B23 403 aaPredicted RBP11.51□□□□□ -0.57
LIG1-210ENST00000596332 EEF2KMTQ96G04 330 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 DHTKD1Q96HY7 919 aaPredicted RBP11.51□□□□□ -0.57
LIG1-210ENST00000596332 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 CCDC94Q9BW85 323 aaPredicted RBP11.51□□□□□ -0.57
LIG1-210ENST00000596332 TRIM6Q9C030 488 aaPredicted RBP11.51□□□□□ -0.57
LIG1-210ENST00000596332 GOLGA2P5Q9HBQ8 144 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 PDE11AQ9HCR9 933 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 MARCH5Q9NX47 278 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 INPP5FQ9Y2H2 1132 aa11.51□□□□□ -0.57
LIG1-210ENST00000596332 NT5C1B-RDH14C9J2C7 533 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 RFXAPO00287 272 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 PPEF2O14830 753 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 KIAA0391O15091 583 aaKnown RBP11.5□□□□□ -0.57
LIG1-210ENST00000596332 HOXA2O43364 376 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 LDHAP00338 332 aaKnown RBP11.5□□□□□ -0.57
LIG1-210ENST00000596332 ITGB1P05556 798 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 DNAJB1P25685 340 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 CYP2J2P51589 502 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 GUCY2FP51841 1108 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 DLG4P78352 724 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 RAB30Q15771 203 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 EPC2Q52LR7 807 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 JADE1Q6IE81 842 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 C11orf57Q6ZUT1 292 aaPredicted RBP11.5□□□□□ -0.57
LIG1-210ENST00000596332 FIBCD1Q8N539 461 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 MLKLQ8NB16 471 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 XXYLT1Q8NBI6 393 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 COLGALT1Q8NBJ5 622 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 RDH13Q8NBN7 331 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 C3orf58Q8NDZ4 430 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 NELFBQ8WX92 580 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 RABGGTAQ92696 567 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 TIFAQ96CG3 184 aa11.5□□□□□ -0.57
LIG1-210ENST00000596332 POP1Q99575 1024 aaKnown RBP11.5□□□□□ -0.57
LIG1-210ENST00000596332 GTPBP4Q9BZE4 634 aaKnown RBP11.5□□□□□ -0.57
LIG1-210ENST00000596332 KIAA1671Q9BY89 1806 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 ANK1P16157 1881 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 TRIP11Q15643 1979 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 ANO9A1A5B4 782 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 NRP1O14786 923 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 MAPK13O15264 365 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 THP07101 528 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 NFICP08651 508 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 BCAR1P56945 870 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 STX17P56962 302 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 CYP24A1Q07973 514 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 GRIK3Q13003 919 aa11.49□□□□□ -0.57
LIG1-210ENST00000596332 ADAM9Q13443 819 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms