RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 NFKBIBQ15653 356 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 KIAA0319Q5VV43 1072 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 HAUS3Q68CZ6 603 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 PLA2G4FQ68DD2 849 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 COLGALT2Q8IYK4 626 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 CALML4Q96GE6 196 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 B3GALT6Q96L58 329 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 MINDY3Q9H8M7 445 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 LMBRD1Q9NUN5 540 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 KANSL3Q9P2N6 904 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 NCDNQ9UBB6 729 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 SSX2IPQ9Y2D8 614 aa17■□□□□ 0.31
FOXA3-202ENST00000594297 CACNA1IQ9P0X4 2223 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 STARD6P59095 220 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 DSG1Q02413 1049 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 PALB2Q86YC2 1186 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 GLYCTKQ8IVS8 523 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 FSIP1Q8NA03 581 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 RDM1Q8NG50 284 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 HDAC7Q8WUI4 952 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 FGF14Q92915 247 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 CLIC6Q96NY7 704 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 RPP25Q9BUL9 199 aaKnown RBP16.99■□□□□ 0.31
FOXA3-202ENST00000594297 NT5C3AQ9H0P0 336 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 ZDHHC7Q9NXF8 308 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.99■□□□□ 0.318e-7■□□□□ 10.7
FOXA3-202ENST00000594297 COL4A3BPQ9Y5P4 624 aa16.99■□□□□ 0.31
FOXA3-202ENST00000594297 GPR179Q6PRD1 2367 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 SPTLC1O15269 473 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 TGM5O43548 720 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 DKC1O60832 514 aaKnown RBP eCLIP16.98■□□□□ 0.31
FOXA3-202ENST00000594297 HOXA11P31270 313 aaPredicted RBP16.98■□□□□ 0.31
FOXA3-202ENST00000594297 MLH1P40692 756 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 DSC1Q08554 894 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 PPP2R5CQ13362 524 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 AXDND1Q5T1B0 1012 aaPredicted RBP16.98■□□□□ 0.31
FOXA3-202ENST00000594297 RESP18Q5W5W9 173 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 B3GNT9Q6UX72 402 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 ANO5Q75V66 913 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 IGSF22Q8N9C0 903 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 SMG8Q8ND04 991 aaKnown RBP16.98■□□□□ 0.31
FOXA3-202ENST00000594297 PRKD2Q9BZL6 878 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 PLEKHA4Q9H4M7 779 aa16.98■□□□□ 0.31
FOXA3-202ENST00000594297 SPATA6Q9NWH7 488 aaPredicted RBP16.98■□□□□ 0.31
FOXA3-202ENST00000594297 SCNN1GP51170 649 aa16.97■□□□□ 0.31
FOXA3-202ENST00000594297 GPC5P78333 572 aa16.97■□□□□ 0.31
FOXA3-202ENST00000594297 ZNF528Q3MIS6 628 aa16.97■□□□□ 0.31
FOXA3-202ENST00000594297 VARS2Q5ST30 1063 aaKnown RBP16.97■□□□□ 0.31
FOXA3-202ENST00000594297 PARM1Q6UWI2 310 aa16.97■□□□□ 0.31
FOXA3-202ENST00000594297 KCTD17Q8N5Z5 321 aa16.97■□□□□ 0.31
FOXA3-202ENST00000594297 SYAP1Q96A49 352 aaPredicted RBP16.97■□□□□ 0.31
FOXA3-202ENST00000594297 DDX23Q9BUQ8 820 aaKnown RBP16.97■□□□□ 0.31
FOXA3-202ENST00000594297 HOOK1Q9UJC3 728 aaKnown RBP16.97■□□□□ 0.31
FOXA3-202ENST00000594297 KCNH3Q9ULD8 1083 aa16.97■□□□□ 0.31
FOXA3-202ENST00000594297 IPPQ9Y573 584 aa16.97■□□□□ 0.31
FOXA3-202ENST00000594297 KANSL1LA0AUZ9 987 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 ARL5CA6NH57 179 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 LAMTOR5O43504 91 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 GADD45BO75293 160 aaPredicted RBP16.96■□□□□ 0.31
FOXA3-202ENST00000594297 RPL17P18621 184 aaKnown RBP16.96■□□□□ 0.31
FOXA3-202ENST00000594297 SYKP43405 635 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 ATXN1P54253 815 aaKnown RBP16.96■□□□□ 0.31
FOXA3-202ENST00000594297 FAM160A1Q05DH4 1040 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 SNW1Q13573 536 aaKnown RBP16.96■□□□□ 0.31
FOXA3-202ENST00000594297 EPHA7Q15375 998 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 IL17AQ16552 155 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 SHC4Q6S5L8 630 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 IQUBQ8NA54 791 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 SNX29Q8TEQ0 813 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 SHDQ96IW2 340 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 ZFP42Q96MM3 310 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 GAD1Q99259 594 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 JPH2Q9BR39 696 aaPredicted RBP16.96■□□□□ 0.31
FOXA3-202ENST00000594297 EIF2AQ9BY44 585 aaKnown RBP16.96■□□□□ 0.31
FOXA3-202ENST00000594297 BCO2Q9BYV7 579 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 CCSER1Q9C0I3 900 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 CHST7Q9NS84 486 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 BMP2KQ9NSY1 1161 aaPredicted RBP16.96■□□□□ 0.31
FOXA3-202ENST00000594297 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 FBXO4Q9UKT5 387 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 VAV3Q9UKW4 847 aa16.96■□□□□ 0.31
FOXA3-202ENST00000594297 SMG5Q9UPR3 1016 aaKnown RBP16.96■□□□□ 0.31
FOXA3-202ENST00000594297 DOCK6Q96HP0 2047 aa16.96■□□□□ 0.3
FOXA3-202ENST00000594297 A0A1B0GVL5 298 aa16.95■□□□□ 0.3
FOXA3-202ENST00000594297 GAS2O43903 313 aaKnown RBP16.95■□□□□ 0.3
FOXA3-202ENST00000594297 ITGA4P13612 1032 aa16.95■□□□□ 0.3
FOXA3-202ENST00000594297 MUTP22033 750 aa16.95■□□□□ 0.3
FOXA3-202ENST00000594297 FSHRP23945 695 aa16.95■□□□□ 0.3
FOXA3-202ENST00000594297 CCT6AP40227 531 aaKnown RBP16.95■□□□□ 0.3
FOXA3-202ENST00000594297 NPEPPSP55786 919 aa16.95■□□□□ 0.3
FOXA3-202ENST00000594297 NTHL1P78549 312 aa16.95■□□□□ 0.3
FOXA3-202ENST00000594297 CSTF1Q05048 431 aaKnown RBP16.95■□□□□ 0.3
FOXA3-202ENST00000594297 UBXN2BQ14CS0 331 aa16.95■□□□□ 0.3
FOXA3-202ENST00000594297 ZRSR1Q15695 479 aaKnown RBP16.95■□□□□ 0.3
FOXA3-202ENST00000594297 MLF2Q15773 248 aaPredicted RBP16.95■□□□□ 0.3
FOXA3-202ENST00000594297 FUT10Q6P4F1 479 aa16.95■□□□□ 0.3
FOXA3-202ENST00000594297 LILRA6Q6PI73 481 aa16.95■□□□□ 0.3
FOXA3-202ENST00000594297 SRGAP1Q7Z6B7 1085 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms