RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 PABPN1LA6NDY0 278 aaKnown RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 TSPY2A6NKD2 308 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 SMTNL1A8MU46 457 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 B4E171 279 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 TISP43B9A030 160 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 B9A039 149 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 FAM227AF5H4B4 570 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 SMIM22K7EJ46 135 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 MAFKO60675 156 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 VAMP4O75379 141 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 SLITRK5O94991 958 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ARIH2O95376 493 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 POU2F2P09086 479 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 TSPY3P0CV98 308 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 TSPY8P0CW00 308 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ZBTB48P10074 688 aaPredicted RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ELNP15502 786 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 SYN1P17600 705 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 XPAP23025 273 aaPredicted RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 PEX2P28328 305 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ALDH1B1P30837 517 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ELF1P32519 619 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 PIK3CAP42336 1068 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 USP11P51784 963 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ST5P78524 1137 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 MRPS5P82675 430 aaKnown RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 TSPY1Q01534 308 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 KRT76Q01546 638 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ICA1Q05084 483 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ARHGEF6Q15052 776 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 RNF220Q5VTB9 566 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 CCDC30Q5VVM6 783 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 BROXQ5VW32 411 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 RSPO2Q6UXX9 243 aaPredicted RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 USP53Q70EK8 1073 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 CDH24Q86UP0 819 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 KIAA0319LQ8IZA0 1049 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 KRT78Q8N1N4 520 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ADAMTS18Q8TE60 1221 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 U2AF1L4Q8WU68 220 aaKnown RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ATP6V1E2Q96A05 226 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 CCDC47Q96A33 483 aaKnown RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ZDHHC15Q96MV8 337 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ZFYVE21Q9BQ24 234 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 DSCC1Q9BVC3 393 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 YIPF2Q9BWQ6 316 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 TTLL2Q9BWV7 592 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 B3GNT5Q9BYG0 378 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 LMAN2LQ9H0V9 348 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 VPS33BQ9H267 617 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 TRIT1Q9H3H1 467 aaKnown RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 CXorf56Q9H5V9 222 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 CEP72Q9P209 647 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 PPARGC1AQ9UBK2 798 aaKnown RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 B4GALT6Q9UBX8 382 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 CCDC39Q9UFE4 941 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 GIMAP2Q9UG22 337 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 RNF112Q9ULX5 631 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ZBTB1Q9Y2K1 713 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 SNX5Q9Y5X3 404 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ZNF646O15015 1829 aaPredicted RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 EDC4Q6P2E9 1401 aaKnown RBP4.78□□□□□ -1.64
LINC00649-204ENST00000593977 A0A1W2PP64 1363 aa4.78□□□□□ -1.64
LINC00649-204ENST00000593977 ZNF318Q5VUA4 2279 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 ASTN2O75129 1339 aaPredicted RBP4.77□□□□□ -1.65
LINC00649-204ENST00000593977 PRAMEF22A3QJZ6 481 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 GTPBP10A4D1E9 387 aaKnown RBP4.77□□□□□ -1.65
LINC00649-204ENST00000593977 PIK3R2O00459 728 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 KPNA5O15131 536 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 PPIP5K2O43314 1243 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 TGM5O43548 720 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 SIGLEC6O43699 453 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 TMEM127O75204 238 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 RAD17O75943 681 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 SGPL1O95470 568 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 DDX58O95786 925 aaKnown RBP4.77□□□□□ -1.65
LINC00649-204ENST00000593977 TBX18O95935 607 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 CSTBP04080 98 aaKnown RBP4.77□□□□□ -1.65
LINC00649-204ENST00000593977 POLBP06746 335 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 DHRS4L1P0CG22 281 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 CCL5P13501 91 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 ATP1A3P13637 1013 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 HOXB4P17483 251 aaPredicted RBP4.77□□□□□ -1.65
LINC00649-204ENST00000593977 RAB6AP20340 208 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 ITGB8P26012 769 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 CNTFP26441 200 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 KRT9P35527 623 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 ECI1P42126 302 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 CASP5P51878 434 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 SNX16P57768 344 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 KRT83P78385 493 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 POU4F1Q01851 419 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 OCRLQ01968 901 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 GUCY1A3Q02108 690 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 TRIM28Q13263 835 aaKnown RBP4.77□□□□□ -1.65
LINC00649-204ENST00000593977 TNIP1Q15025 636 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 CCNG2Q16589 344 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 AOC3Q16853 763 aa4.77□□□□□ -1.65
LINC00649-204ENST00000593977 DNAJC21Q5F1R6 531 aaKnown RBP4.77□□□□□ -1.65
LINC00649-204ENST00000593977 FAM209BQ5JX69 171 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms