RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SNTG2Q9NY99 539 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 FBXW11Q9UKB1 542 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 POLIQ9UNA4 740 aa16.27■□□□□ 0.2
PNKP-202ENST00000593706 CEP250Q9BV73 2442 aa16.27■□□□□ 0.19
PNKP-202ENST00000593706 COL4A3Q01955 1670 aa16.27■□□□□ 0.19
PNKP-202ENST00000593706 TICRRQ7Z2Z1 1910 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 PAPLNO95428 1278 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 PRKCBP05771 671 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 THP07101 528 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 C8AP07357 584 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 FOXK2Q01167 660 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 MAPK6Q16659 721 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 POTEGQ6S5H5 508 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 GRASPQ7Z6J2 395 aaPredicted RBP16.26■□□□□ 0.19
PNKP-202ENST00000593706 CATSPER3Q86XQ3 398 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 ST13P5Q8NFI4 369 aaPredicted RBP16.26■□□□□ 0.19
PNKP-202ENST00000593706 ERMNQ8TAM6 284 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 PIK3R5Q8WYR1 880 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 TBC1D32Q96NH3 1257 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 NACC1Q96RE7 527 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 TMEM60Q9H2L4 133 aa16.26■□□□□ 0.19
PNKP-202ENST00000593706 ZFP37Q9Y6Q3 630 aaPredicted RBP16.26■□□□□ 0.19
PNKP-202ENST00000593706 ARHGEF35A5YM69 484 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 ANHXE9PGG2 379 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 PTGESO14684 152 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 MED24O75448 989 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 DCNP07585 359 aaKnown RBP16.25■□□□□ 0.19
PNKP-202ENST00000593706 HNRNPA1P09651 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
PNKP-202ENST00000593706 SPATA31C1P0DKV0 1188 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
PNKP-202ENST00000593706 ELAVL2Q12926 359 aaKnown RBP16.25■□□□□ 0.19
PNKP-202ENST00000593706 SAFBQ15424 915 aaKnown RBP eCLIP16.25■□□□□ 0.19
PNKP-202ENST00000593706 FAM187BQ17R55 369 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 PDXDC1Q6P996 788 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 DCLRE1AQ6PJP8 1040 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 FBXO18Q8NFZ0 1043 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 DEPTORQ8TB45 409 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 FZD8Q9H461 694 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 SIT1Q9Y3P8 196 aa16.25■□□□□ 0.19
PNKP-202ENST00000593706 TTLL13PA6NNM8 815 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 CCL16O15467 120 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 XYLBO75191 536 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 NTHL1P78549 312 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 GUCY1B3Q02153 619 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 PPP2R5AQ15172 486 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 DCAF4L1Q3SXM0 396 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 PHLDB3Q6NSJ2 640 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 ZC3H14Q6PJT7 736 aaKnown RBP16.24■□□□□ 0.19
PNKP-202ENST00000593706 PADI6Q6TGC4 694 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 SLC7A14Q8TBB6 771 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 FGF14Q92915 247 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 CLSTN3Q9BQT9 956 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 POLR3CQ9BUI4 534 aaPredicted RBP16.24■□□□□ 0.19
PNKP-202ENST00000593706 SLC2A4RGQ9NR83 387 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 CDH7Q9ULB5 785 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 GDAQ9Y2T3 454 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 R4GN57 208 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 ANK1P16157 1881 aa16.24■□□□□ 0.19
PNKP-202ENST00000593706 LMNAP02545 664 aaKnown RBP16.23■□□□□ 0.19
PNKP-202ENST00000593706 HOXA9P31269 272 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 NAMPTP43490 491 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 ID4P47928 161 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.23■□□□□ 0.19
PNKP-202ENST00000593706 MTSS1LQ765P7 747 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 PJA1Q8NG27 643 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 LNX1Q8TBB1 728 aaPredicted RBP16.23■□□□□ 0.19
PNKP-202ENST00000593706 BSNDQ8WZ55 320 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 SHDQ96IW2 340 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 C8orf76Q96K31 380 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 IFT74Q96LB3 600 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 HINFPQ9BQA5 517 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 FOXQ1Q9C009 403 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 CCDC113Q9H0I3 377 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 FOXP1Q9H334 677 aaPredicted RBP16.23■□□□□ 0.19
PNKP-202ENST00000593706 SEMA4AQ9H3S1 761 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 USP20Q9Y2K6 914 aa16.23■□□□□ 0.19
PNKP-202ENST00000593706 ACKR2O00590 384 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 OR52Z1P0C646 297 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 RPA1P27694 616 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 NAB2Q15742 525 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 GLRA4Q5JXX5 417 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 AXDND1Q5T1B0 1012 aaPredicted RBP16.22■□□□□ 0.19
PNKP-202ENST00000593706 HAUS3Q68CZ6 603 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 PARM1Q6UWI2 310 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 APBB1IPQ7Z5R6 666 aaPredicted RBP16.22■□□□□ 0.19
PNKP-202ENST00000593706 FGF13Q92913 245 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 KIFC3Q9BVG8 833 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 CXCL16Q9H2A7 254 aa16.22■□□□□ 0.19
PNKP-202ENST00000593706 ADAM12O43184 909 aa16.21■□□□□ 0.19
PNKP-202ENST00000593706 B3GAT3O94766 335 aa16.21■□□□□ 0.19
PNKP-202ENST00000593706 EDN1P05305 212 aa16.21■□□□□ 0.19
PNKP-202ENST00000593706 CYP11B2P19099 503 aa16.21■□□□□ 0.19
PNKP-202ENST00000593706 OR1D2P34982 312 aa16.21■□□□□ 0.19
PNKP-202ENST00000593706 EFNA5P52803 228 aa16.21■□□□□ 0.19
PNKP-202ENST00000593706 GPC5P78333 572 aa16.21■□□□□ 0.19
PNKP-202ENST00000593706 GNL2Q13823 731 aaKnown RBP16.21■□□□□ 0.19
PNKP-202ENST00000593706 ATF7IP2Q5U623 682 aa16.21■□□□□ 0.19
PNKP-202ENST00000593706 EEF1DP3Q658K8 133 aa16.21■□□□□ 0.19
PNKP-202ENST00000593706 ERMP1Q7Z2K6 904 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms