RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 CCL16O15467 120 aa20.58■□□□□ 0.89
PDE4C-205ENST00000593594 ADAM12O43184 909 aa20.58■□□□□ 0.89
PDE4C-205ENST00000593594 ATP2B1P20020 1258 aa20.58■□□□□ 0.89
PDE4C-205ENST00000593594 HOXA9P31269 272 aa20.58■□□□□ 0.89
PDE4C-205ENST00000593594 ELAVL2Q12926 359 aaKnown RBP20.58■□□□□ 0.89
PDE4C-205ENST00000593594 NAB2Q15742 525 aa20.58■□□□□ 0.89
PDE4C-205ENST00000593594 KIAA2013Q8IYS2 634 aa20.58■□□□□ 0.89
PDE4C-205ENST00000593594 NECAB1Q8N987 351 aa20.58■□□□□ 0.89
PDE4C-205ENST00000593594 FGF13Q92913 245 aa20.58■□□□□ 0.89
PDE4C-205ENST00000593594 MYH15Q9Y2K3 1946 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 XYLBO75191 536 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 LRRN2O75325 713 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 RECQL4O94761 1208 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 PRPF4BQ13523 1007 aaKnown RBP20.57■□□□□ 0.88
PDE4C-205ENST00000593594 SNW1Q13573 536 aaKnown RBP20.57■□□□□ 0.88
PDE4C-205ENST00000593594 ANKRD1Q15327 319 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 TMEM132AQ24JP5 1023 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 PDXDC1Q6P996 788 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 MTSS1LQ765P7 747 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 CATSPER3Q86XQ3 398 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 DIS3L2Q8IYB7 885 aaKnown RBP20.57■□□□□ 0.88
PDE4C-205ENST00000593594 RMDN1Q96DB5 314 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 C2orf40Q9H1Z8 148 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 POLIQ9UNA4 740 aa20.57■□□□□ 0.88
PDE4C-205ENST00000593594 FRYLO94915 3013 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 FANCMQ8IYD8 2048 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 KANSL1LA0AUZ9 987 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 MED24O75448 989 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 MAPK6Q16659 721 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 NOSTRINQ8IVI9 506 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 MAML2Q8IZL2 1156 aaPredicted RBP20.56■□□□□ 0.88
PDE4C-205ENST00000593594 ITFG1Q8TB96 612 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 SLC7A14Q8TBB6 771 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 BSNDQ8WZ55 320 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 ADPGKQ9BRR6 497 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 TMEM60Q9H2L4 133 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 TUFT1Q9NNX1 390 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 USP20Q9Y2K6 914 aa20.56■□□□□ 0.88
PDE4C-205ENST00000593594 CEP250Q9BV73 2442 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 VWA8A3KMH1 1905 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 GPR179Q6PRD1 2367 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 PRKCBP05771 671 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 POU2F2P09086 479 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 OR1D2P34982 312 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 RAB33AQ14088 237 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 MLF2Q15773 248 aaPredicted RBP20.55■□□□□ 0.88
PDE4C-205ENST00000593594 AXDND1Q5T1B0 1012 aaPredicted RBP20.55■□□□□ 0.88
PDE4C-205ENST00000593594 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.55■□□□□ 0.88
PDE4C-205ENST00000593594 NSUN7Q8NE18 718 aaKnown RBP20.55■□□□□ 0.88
PDE4C-205ENST00000593594 NACC1Q96RE7 527 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 HINFPQ9BQA5 517 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 DDX23Q9BUQ8 820 aaKnown RBP20.55■□□□□ 0.88
PDE4C-205ENST00000593594 CCDC113Q9H0I3 377 aa20.55■□□□□ 0.88
PDE4C-205ENST00000593594 ACKR2O00590 384 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 LARGE1O95461 756 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 EDN1P05305 212 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 LIG1P18858 919 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 FGFR3P22607 806 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 IGFBP6P24592 240 aaPredicted RBP20.54■□□□□ 0.88
PDE4C-205ENST00000593594 FOSBP53539 338 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 ME3Q16798 604 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 UVSSAQ2YD98 709 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 SLC44A4Q53GD3 710 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 EEF1DP3Q658K8 133 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 RUBCNQ92622 972 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 GTF3C6Q969F1 213 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 HCFC1R1Q9NWW0 138 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 GDAQ9Y2T3 454 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 COL4A3Q01955 1670 aa20.54■□□□□ 0.88
PDE4C-205ENST00000593594 MIA3Q5JRA6 1907 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 CYP11B2P19099 503 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 MCM7P33993 719 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 PRKCQQ04759 706 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 TRIM29Q14134 588 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 PABPC1LQ4VXU2 614 aaKnown RBP20.53■□□□□ 0.88
PDE4C-205ENST00000593594 PADI6Q6TGC4 694 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 SUMF1Q8NBK3 374 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 KXD1Q9BQD3 176 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 POLR3CQ9BUI4 534 aaPredicted RBP20.53■□□□□ 0.88
PDE4C-205ENST00000593594 BCO2Q9BYV7 579 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 SPATA6Q9NWH7 488 aaPredicted RBP20.53■□□□□ 0.88
PDE4C-205ENST00000593594 DNMT3BQ9UBC3 853 aaKnown RBP20.53■□□□□ 0.88
PDE4C-205ENST00000593594 MTRRQ9UBK8 725 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 KCNH3Q9ULD8 1083 aa20.53■□□□□ 0.88
PDE4C-205ENST00000593594 MTF2Q9Y483 593 aaPredicted RBP20.53■□□□□ 0.88
PDE4C-205ENST00000593594 TMEM189-UBE2V1I3L0A0 370 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 NAMPTP43490 491 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 RBM25P49756 843 aaKnown RBP20.52■□□□□ 0.88
PDE4C-205ENST00000593594 ANAPC15P60006 121 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 PFKPQ01813 784 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 UBXN2BQ14CS0 331 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 ZNF528Q3MIS6 628 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 RSPO2Q6UXX9 243 aaPredicted RBP20.52■□□□□ 0.88
PDE4C-205ENST00000593594 DGLUCYQ7Z3D6 616 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 NPAS3Q8IXF0 933 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 DCLK2Q8N568 766 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 DEPTORQ8TB45 409 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 OSBPL6Q9BZF3 934 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 CDY1Q9Y6F8 540 aa20.52■□□□□ 0.88
PDE4C-205ENST00000593594 NOTCH4Q99466 2003 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms