RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SPECC1Q5M775 1068 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 LIN9Q5TKA1 542 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 FGF14Q92915 247 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 POLD4Q9HCU8 107 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 SLC2A4RGQ9NR83 387 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 GDAQ9Y2T3 454 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 NOTCH4Q99466 2003 aa18.05■□□□□ 0.48
LIG1-205ENST00000593425 ARHGEF35A5YM69 484 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 CCL16O15467 120 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 DCNP07585 359 aaKnown RBP18.04■□□□□ 0.48
LIG1-205ENST00000593425 OR52Z1P0C646 297 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 ZNF174Q15697 407 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 GLRA4Q5JXX5 417 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 PPM1LQ5SGD2 360 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 PHLDB3Q6NSJ2 640 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 PARM1Q6UWI2 310 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 DEPTORQ8TB45 409 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 ADPGKQ9BRR6 497 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 DLGAP2Q9P1A6 1054 aa18.04■□□□□ 0.48
LIG1-205ENST00000593425 VPS13AQ96RL7 3174 aa18.03■□□□□ 0.48
LIG1-205ENST00000593425 HNRNPA1P09651 372 aaKnown RBP eCLIP18.03■□□□□ 0.48
LIG1-205ENST00000593425 ELAVL2Q12926 359 aaKnown RBP18.03■□□□□ 0.48
LIG1-205ENST00000593425 ECM1Q16610 540 aa18.03■□□□□ 0.48
LIG1-205ENST00000593425 DCLRE1AQ6PJP8 1040 aa18.03■□□□□ 0.48
LIG1-205ENST00000593425 ERMNQ8TAM6 284 aa18.03■□□□□ 0.48
LIG1-205ENST00000593425 FOXQ1Q9C009 403 aa18.03■□□□□ 0.48
LIG1-205ENST00000593425 CDH7Q9ULB5 785 aa18.03■□□□□ 0.48
LIG1-205ENST00000593425 ZFP37Q9Y6Q3 630 aaPredicted RBP18.03■□□□□ 0.48
LIG1-205ENST00000593425 MIA3Q5JRA6 1907 aa18.03■□□□□ 0.48
LIG1-205ENST00000593425 FGFR3P22607 806 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 HOXA9P31269 272 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 GPC5P78333 572 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 SAFBQ15424 915 aaKnown RBP eCLIP18.02■□□□□ 0.48
LIG1-205ENST00000593425 NT5DC1Q5TFE4 455 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 CD300LGQ6UXG3 332 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 RSPO2Q6UXX9 243 aaPredicted RBP18.02■□□□□ 0.48
LIG1-205ENST00000593425 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.02■□□□□ 0.48
LIG1-205ENST00000593425 FANCMQ8IYD8 2048 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 ITFG1Q8TB96 612 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 SLC7A14Q8TBB6 771 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 FGF13Q92913 245 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 PPP1R10Q96QC0 940 aaKnown RBP18.02■□□□□ 0.48
LIG1-205ENST00000593425 GOLGA2P5Q9HBQ8 144 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 HCFC1R1Q9NWW0 138 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 POLIQ9UNA4 740 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 SIT1Q9Y3P8 196 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 R4GN57 208 aa18.02■□□□□ 0.48
LIG1-205ENST00000593425 PATJQ8NI35 1801 aa18.02■□□□□ 0.47
LIG1-205ENST00000593425 TMEM189-UBE2V1I3L0A0 370 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 LRRN2O75325 713 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 GLULP15104 373 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 OR1D2P34982 312 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 CLCNKBP51801 687 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 ORC2Q13416 577 aaPredicted RBP18.01■□□□□ 0.47
LIG1-205ENST00000593425 RAB33AQ14088 237 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 PPP2R5AQ15172 486 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 DCAF4L1Q3SXM0 396 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 AXDND1Q5T1B0 1012 aaPredicted RBP18.01■□□□□ 0.47
LIG1-205ENST00000593425 CCDC83Q8IWF9 413 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 C3orf58Q8NDZ4 430 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 C8orf76Q96K31 380 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 BHMT2Q9H2M3 363 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 MTRRQ9UBK8 725 aa18.01■□□□□ 0.47
LIG1-205ENST00000593425 I3L4J1 428 aa18■□□□□ 0.47
LIG1-205ENST00000593425 B3GAT3O94766 335 aa18■□□□□ 0.47
LIG1-205ENST00000593425 TKTP29401 623 aaKnown RBP18■□□□□ 0.47
LIG1-205ENST00000593425 CCT6AP40227 531 aaKnown RBP18■□□□□ 0.47
LIG1-205ENST00000593425 RBM25P49756 843 aaKnown RBP18■□□□□ 0.47
LIG1-205ENST00000593425 STARD6P59095 220 aa18■□□□□ 0.47
LIG1-205ENST00000593425 NBR1Q14596 966 aa18■□□□□ 0.47
LIG1-205ENST00000593425 TTC38Q5R3I4 469 aa18■□□□□ 0.47
LIG1-205ENST00000593425 ATF7IP2Q5U623 682 aa18■□□□□ 0.47
LIG1-205ENST00000593425 HAUS3Q68CZ6 603 aa18■□□□□ 0.47
LIG1-205ENST00000593425 PDXDC1Q6P996 788 aa18■□□□□ 0.47
LIG1-205ENST00000593425 CEP120Q8N960 986 aa18■□□□□ 0.47
LIG1-205ENST00000593425 PJA1Q8NG27 643 aa18■□□□□ 0.47
LIG1-205ENST00000593425 DDX27Q96GQ7 796 aaKnown RBP18■□□□□ 0.47
LIG1-205ENST00000593425 DNMT3BQ9UBC3 853 aaKnown RBP18■□□□□ 0.47
LIG1-205ENST00000593425 CDY1Q9Y6F8 540 aa18■□□□□ 0.47
LIG1-205ENST00000593425 XYLBO75191 536 aa17.99■□□□□ 0.47
LIG1-205ENST00000593425 POU2F2P09086 479 aa17.99■□□□□ 0.47
LIG1-205ENST00000593425 MUTP22033 750 aa17.99■□□□□ 0.47
LIG1-205ENST00000593425 BRCC3P46736 316 aa17.99■□□□□ 0.47
LIG1-205ENST00000593425 SNW1Q13573 536 aaKnown RBP17.99■□□□□ 0.47
LIG1-205ENST00000593425 UPP1Q16831 310 aa17.99■□□□□ 0.47
LIG1-205ENST00000593425 NPAS3Q8IXF0 933 aa17.99■□□□□ 0.47
LIG1-205ENST00000593425 C4orf32Q8N8J7 132 aa17.99■□□□□ 0.47
LIG1-205ENST00000593425 IFT74Q96LB3 600 aa17.99■□□□□ 0.47
LIG1-205ENST00000593425 FOXP1Q9H334 677 aaPredicted RBP17.99■□□□□ 0.47
LIG1-205ENST00000593425 FAM186AA6NE01 2351 aa17.99■□□□□ 0.47
LIG1-205ENST00000593425 SEC24BO95487 1268 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 LMNAP02545 664 aaKnown RBP17.98■□□□□ 0.47
LIG1-205ENST00000593425 SP9P0CG40 484 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 ID4P47928 161 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 FXR2P51116 673 aaKnown RBP eCLIP17.98■□□□□ 0.47
LIG1-205ENST00000593425 EFNA5P52803 228 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 SOX4Q06945 474 aaPredicted RBP17.98■□□□□ 0.47
LIG1-205ENST00000593425 UVSSAQ2YD98 709 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 MTSS1LQ765P7 747 aa17.98■□□□□ 0.47
LIG1-205ENST00000593425 C1orf210Q8IVY1 113 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms