RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 CRACR2AQ9BSW2 395 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 LSM14BQ9BX40 385 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 TMEM117Q9H0C3 514 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 GANQ9H2C0 597 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 KCNF1Q9H3M0 494 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 MMRN2Q9H8L6 949 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 PDE11AQ9HCR9 933 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 SIX2Q9NPC8 291 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 TOPORSQ9NS56 1045 aaPredicted RBP12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 CAPN11Q9UMQ6 739 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 PIN4Q9Y237 131 aaKnown RBP12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 COQ4Q9Y3A0 265 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 CITO14578 2027 aa12.5□□□□□ -0.41
CACNA1A-213ENST00000593267 PTPRJQ12913 1337 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 A0A1W2PPC1 479 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 RNF225M0QZC1 329 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 NPTXRO95502 500 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 STAG3L1P0CL83 205 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 DLATP10515 647 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 SLC9A1P19634 815 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 AP3M2P53677 418 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 UBXN11Q5T124 520 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 C1orf53Q5VUE5 145 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 KRT39Q6A163 491 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 ANKRD33Q7Z3H0 272 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 WDR49Q8IV35 697 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 TMEM192Q8IY95 271 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 USP38Q8NB14 1042 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 NEK11Q8NG66 645 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 LMO3Q8TAP4 145 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 ZNF516Q92618 1163 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 POP1Q99575 1024 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 EIF2AQ9BY44 585 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 EDEM3Q9BZQ6 932 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 INTS2Q9H0H0 1204 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 PRO3102Q9H379 93 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 RPF1Q9H9Y2 349 aaKnown RBP12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 ERVK-5Q9HDB9 667 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 CHST12Q9NRB3 414 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 FAM207AQ9NSI2 230 aaPredicted RBP12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 CEP72Q9P209 647 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 FBXL5Q9UKA1 691 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 DAAM1Q9Y4D1 1078 aa12.49□□□□□ -0.41
CACNA1A-213ENST00000593267 A0A0C4DFX4 3053 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 GPR182O15218 404 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 MEFVO15553 781 aaPredicted RBP12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 C4BPAP04003 597 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 CXCL8P10145 99 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 GHRP10912 638 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 TNNI1P19237 187 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 FECHP22830 423 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 ADKP55263 362 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 OSTNP61366 133 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 ZBED6P86452 979 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 GOLGA8FQ08AF8 430 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 GOLGA8DPQ0D2H9 430 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 CETN1Q12798 172 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 LPIN1Q14693 890 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 ZACNQ401N2 412 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 KLHDC7AQ5VTJ3 777 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 SLC39A5Q6ZMH5 540 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 SV2AQ7L0J3 742 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 NECAB2Q7Z6G3 386 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 EHBP1Q8NDI1 1231 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 CPLX3Q8WVH0 158 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 PAWRQ96IZ0 340 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 ACAP3Q96P50 834 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 PANX2Q96RD6 677 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 DNAJC7Q99615 494 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 OSBPL7Q9BZF2 842 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 TMX1Q9H3N1 280 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 ASB7Q9H672 318 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 AGO3Q9H9G7 860 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 ST3GAL5Q9UNP4 418 aa12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 LUC7L2Q9Y383 392 aaKnown RBP12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
CACNA1A-213ENST00000593267 ALPK3Q96L96 1907 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 TLR3O15455 904 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 ACTN1P12814 892 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 UCHL3P15374 230 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 CD52P31358 61 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 KRT9P35527 623 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 CCZ1BP86790 482 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 CCZ1P86791 482 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 APBA1Q02410 837 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 LRMPQ12912 555 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 PAK2Q13177 524 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 BFSP2Q13515 415 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 DSC3Q14574 896 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 MBTPS1Q14703 1052 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 SLC10A6Q3KNW5 377 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 TDRD10Q5VZ19 366 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 LMBRD2Q68DH5 695 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 TMEM139Q8IV31 216 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 CD302Q8IX05 232 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 EFCAB13Q8IY85 973 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 FBXL13Q8NEE6 735 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 OR5B17Q8NGF7 314 aa12.47□□□□□ -0.41
CACNA1A-213ENST00000593267 DIS3LQ8TF46 1054 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms