RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 HOXA9P31269 272 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 GRM5P41594 1212 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 NPTX2P47972 431 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 MCM2P49736 904 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 YARSP54577 528 aaKnown RBP14.59□□□□□ -0.07
APOC1-209ENST00000592885 PEX3P56589 373 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 PSMD5Q16401 504 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 NT5DC1Q5TFE4 455 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 PALB2Q86YC2 1186 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 DAW1Q8N136 415 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 FEZF2Q8TBJ5 459 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 PPP1R10Q96QC0 940 aaKnown RBP14.59□□□□□ -0.07
APOC1-209ENST00000592885 CCDC94Q9BW85 323 aaPredicted RBP14.59□□□□□ -0.07
APOC1-209ENST00000592885 PRKD2Q9BZL6 878 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 KCNK12Q9HB15 430 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 KMT5AQ9NQR1 393 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 KCND2Q9NZV8 630 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 GDAQ9Y2T3 454 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 DOCK8Q8NF50 2099 aa14.59□□□□□ -0.07
APOC1-209ENST00000592885 MYH11P35749 1972 aa14.58□□□□□ -0.07
APOC1-209ENST00000592885 CITO14578 2027 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 CCDC169A6NNP5 214 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 E9PMD0 336 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 SLC26A4O43511 780 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 GALR2O43603 387 aaPredicted RBP14.58□□□□□ -0.08
APOC1-209ENST00000592885 RFPL2O75678 378 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 PDGFBP01127 241 aaPredicted RBP14.58□□□□□ -0.08
APOC1-209ENST00000592885 POU2F2P09086 479 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 GBP2P32456 591 aaPredicted RBP14.58□□□□□ -0.08
APOC1-209ENST00000592885 CLCN5P51795 746 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 MAPK7Q13164 816 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 ZNF568Q3ZCX4 644 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 LIN9Q5TKA1 542 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 FAM171A1Q5VUB5 890 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 ARL6IP4Q66PJ3 421 aaKnown RBP14.58□□□□□ -0.08
APOC1-209ENST00000592885 MCTP1Q6DN14 999 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.08
APOC1-209ENST00000592885 RINT1Q6NUQ1 792 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 DCLRE1AQ6PJP8 1040 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 PRSS55Q6UWB4 352 aaPredicted RBP14.58□□□□□ -0.08
APOC1-209ENST00000592885 C1orf186Q6ZWK4 172 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 RTL10Q7L3V2 364 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 LNX1Q8TBB1 728 aaPredicted RBP14.58□□□□□ -0.08
APOC1-209ENST00000592885 HASPINQ8TF76 798 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 RABGGTAQ92696 567 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 TMX3Q96JJ7 454 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 ACO2Q99798 780 aaKnown RBP14.58□□□□□ -0.08
APOC1-209ENST00000592885 CDT1Q9H211 546 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 MFSD1Q9H3U5 465 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 PIDD1Q9HB75 910 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 SLC38A7Q9NVC3 462 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.58□□□□□ -0.08
APOC1-209ENST00000592885 CACNG4Q9UBN1 327 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 ZFP37Q9Y6Q3 630 aaPredicted RBP14.58□□□□□ -0.08
APOC1-209ENST00000592885 TRIP11Q15643 1979 aa14.58□□□□□ -0.08
APOC1-209ENST00000592885 PDCD11Q14690 1871 aaKnown RBP14.57□□□□□ -0.08
APOC1-209ENST00000592885 PP2D1A8MPX8 630 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 H3BQV1 296 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 TRAPPC3O43617 180 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 N4BP1O75113 896 aaKnown RBP14.57□□□□□ -0.08
APOC1-209ENST00000592885 MCF2P10911 925 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 RPL17P18621 184 aaKnown RBP14.57□□□□□ -0.08
APOC1-209ENST00000592885 FGFR3P22607 806 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 PROZP22891 400 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 IL17AQ16552 155 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 XKR4Q5GH76 650 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 CEP57Q86XR8 500 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 GLYCTKQ8IVS8 523 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 SPIRE2Q8WWL2 714 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 DDX27Q96GQ7 796 aaKnown RBP14.57□□□□□ -0.08
APOC1-209ENST00000592885 CLSTN3Q9BQT9 956 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 NTPCRQ9BSD7 190 aaKnown RBP14.57□□□□□ -0.08
APOC1-209ENST00000592885 MMTAG2Q9BU76 263 aaKnown RBP14.57□□□□□ -0.08
APOC1-209ENST00000592885 RUSC1Q9BVN2 902 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 SMOC2Q9H3U7 446 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 PTPRHQ9HD43 1115 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 USP20Q9Y2K6 914 aa14.57□□□□□ -0.08
APOC1-209ENST00000592885 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.57□□□□□ -0.08
APOC1-209ENST00000592885 SPATA31D3P0C874 917 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 SCP2P22307 547 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 GJB2P29033 226 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 SMTNP53814 917 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 STRN3Q13033 797 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 UPP1Q16831 310 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 GLRA4Q5JXX5 417 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 MPZL3Q6UWV2 235 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 ALKAL1Q6UXT8 129 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 SPATA31D4Q6ZUB0 917 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 ANKS3Q6ZW76 656 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 TMEM105Q8N8V8 129 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 SYT2Q8N9I0 419 aaPredicted RBP14.56□□□□□ -0.08
APOC1-209ENST00000592885 KCNN1Q92952 543 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 CDK5RAP3Q96JB5 506 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 SNX27Q96L92 541 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 AK8Q96MA6 479 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 MTRRQ9UBK8 725 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 BACE2Q9Y5Z0 518 aa14.56□□□□□ -0.08
APOC1-209ENST00000592885 SMIM28A0A1B0GU29 152 aa14.55□□□□□ -0.08
APOC1-209ENST00000592885 H0YCG3 227 aa14.55□□□□□ -0.08
APOC1-209ENST00000592885 ABLIM1O14639 778 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms