RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 STRN3Q13033 797 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 USP41Q3LFD5 358 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 SPECC1Q5M775 1068 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 MPZL3Q6UWV2 235 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 TMC5Q6UXY8 1006 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 RIN2Q8WYP3 895 aaPredicted RBP15.22■□□□□ 0.03
APOC1-208ENST00000592535 EPSTI1Q96J88 318 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 ZBTB45Q96K62 511 aaPredicted RBP15.22■□□□□ 0.03
APOC1-208ENST00000592535 NECTIN4Q96NY8 510 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 PPP1R10Q96QC0 940 aaKnown RBP15.22■□□□□ 0.03
APOC1-208ENST00000592535 TCHPQ9BT92 498 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 CCDC94Q9BW85 323 aaPredicted RBP15.22■□□□□ 0.03
APOC1-208ENST00000592535 CCSER1Q9C0I3 900 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 SFXN1Q9H9B4 322 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 KCNG1Q9UIX4 513 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 FBXO2Q9UK22 296 aaPredicted RBP15.22■□□□□ 0.03
APOC1-208ENST00000592535 ODF2LQ9ULJ1 636 aa15.22■□□□□ 0.03
APOC1-208ENST00000592535 SF3B1O75533 1304 aaKnown RBP eCLIP15.21■□□□□ 0.03
APOC1-208ENST00000592535 SPDYE4A6NLX3 237 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 STX6O43752 255 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 BRD1O95696 1058 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 MYBP10242 640 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 YARSP54577 528 aaKnown RBP15.21■□□□□ 0.03
APOC1-208ENST00000592535 RTP2Q5QGT7 225 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 PRSS55Q6UWB4 352 aaPredicted RBP15.21■□□□□ 0.03
APOC1-208ENST00000592535 SNX21Q969T3 373 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 RIPOR3Q96MK2 946 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 CLIC6Q96NY7 704 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 USP28Q96RU2 1077 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 MAN1C1Q9NR34 630 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 TSHZ2Q9NRE2 1034 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 LARSQ9P2J5 1176 aaKnown RBP15.21■□□□□ 0.03
APOC1-208ENST00000592535 ANKFY1Q9P2R3 1169 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 SRPRBQ9Y5M8 271 aaKnown RBP15.21■□□□□ 0.03
APOC1-208ENST00000592535 MYO10Q9HD67 2058 aa15.21■□□□□ 0.03
APOC1-208ENST00000592535 TECTAO75443 2155 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 SMIM28A0A1B0GU29 152 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 PRR33A8MZF0 331 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 FAM13AO94988 1023 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 GLUD1P00367 558 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 RPL17P18621 184 aaKnown RBP15.2■□□□□ 0.02
APOC1-208ENST00000592535 IGFBP6P24592 240 aaPredicted RBP15.2■□□□□ 0.02
APOC1-208ENST00000592535 SOX4Q06945 474 aaPredicted RBP15.2■□□□□ 0.02
APOC1-208ENST00000592535 SEZ6Q53EL9 994 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 XKR4Q5GH76 650 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 ATAT1Q5SQI0 421 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 FAM171A1Q5VUB5 890 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 ALKAL1Q6UXT8 129 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 HAUS6Q7Z4H7 955 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 GPR149Q86SP6 731 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 PALB2Q86YC2 1186 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 GLYCTKQ8IVS8 523 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 GPR65Q8IYL9 337 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 LARP4BQ92615 738 aaKnown RBP15.2■□□□□ 0.02
APOC1-208ENST00000592535 SNX27Q96L92 541 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 ACAP3Q96P50 834 aa15.2■□□□□ 0.02
APOC1-208ENST00000592535 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.2■□□□□ 0.028e-7■■□□□ 11.5
APOC1-208ENST00000592535 TOPORSQ9NS56 1045 aaPredicted RBP15.2■□□□□ 0.02
APOC1-208ENST00000592535 C2CD4DB7Z1M9 353 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 H0YCG3 227 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
APOC1-208ENST00000592535 TOM1L1O75674 476 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 KRT18P05783 430 aaKnown RBP15.19■□□□□ 0.02
APOC1-208ENST00000592535 SPATA31D3P0C874 917 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 CLCNKBP51801 687 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 ZNF131P52739 623 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 NOLC1Q14978 699 aaKnown RBP eCLIP15.19■□□□□ 0.02
APOC1-208ENST00000592535 CD300LGQ6UXG3 332 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 ZPBP2Q6X784 338 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 SPATA31D4Q6ZUB0 917 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 CEP57Q86XR8 500 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 MYCT1Q8N699 235 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 EDAQ92838 391 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 ZMAT2Q96NC0 199 aaKnown RBP15.19■□□□□ 0.02
APOC1-208ENST00000592535 TTPALQ9BTX7 342 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 HAPLN2Q9GZV7 340 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 ZHX3Q9H4I2 956 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 ZSCAN16Q9H4T2 348 aaPredicted RBP15.19■□□□□ 0.02
APOC1-208ENST00000592535 PARVGQ9HBI0 331 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 FNIP2Q9P278 1114 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 NR2E1Q9Y466 385 aa15.19■□□□□ 0.02
APOC1-208ENST00000592535 TMEM189-UBE2V1I3L0A0 370 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 K7ENM7 598 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 TGM5O43548 720 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 TRAK2O60296 914 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 B3GAT3O94766 335 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 DDIT3P35638 169 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 MATR3P43243 847 aaKnown RBP eCLIP15.18■□□□□ 0.02
APOC1-208ENST00000592535 CREMQ03060 361 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 MCL1Q07820 350 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 ELAVL2Q12926 359 aaKnown RBP15.18■□□□□ 0.02
APOC1-208ENST00000592535 SLC39A14Q15043 492 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 UPP1Q16831 310 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 DCLRE1AQ6PJP8 1040 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 HSCBQ8IWL3 235 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 C3orf58Q8NDZ4 430 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 LNX1Q8TBB1 728 aaPredicted RBP15.18■□□□□ 0.02
APOC1-208ENST00000592535 PIK3R5Q8WYR1 880 aa15.18■□□□□ 0.02
APOC1-208ENST00000592535 KCNN1Q92952 543 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms