RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 ITFG1Q8TB96 612 aa20.23■□□□□ 0.83
CIRBP-238ENST00000592412 BSNDQ8WZ55 320 aa20.23■□□□□ 0.83
CIRBP-238ENST00000592412 FGF13Q92913 245 aa20.23■□□□□ 0.83
CIRBP-238ENST00000592412 TMEM60Q9H2L4 133 aa20.23■□□□□ 0.83
CIRBP-238ENST00000592412 PRMT7Q9NVM4 692 aaPredicted RBP20.23■□□□□ 0.83
CIRBP-238ENST00000592412 MED19A0JLT2 244 aaPredicted RBP20.22■□□□□ 0.83
CIRBP-238ENST00000592412 BTBD18B2RXH4 712 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 CCL16O15467 120 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 NEMFO60524 1076 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 RECQL4O94761 1208 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 LARGE1O95461 756 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 HOXA9P31269 272 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 SNW1Q13573 536 aaKnown RBP20.22■□□□□ 0.83
CIRBP-238ENST00000592412 POTEHQ6S545 545 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 CEP57Q86XR8 500 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 DCLK2Q8N568 766 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 CCDC43Q96MW1 224 aaKnown RBP20.22■□□□□ 0.83
CIRBP-238ENST00000592412 CCDC113Q9H0I3 377 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 MTF2Q9Y483 593 aaPredicted RBP20.22■□□□□ 0.83
CIRBP-238ENST00000592412 PATJQ8NI35 1801 aa20.22■□□□□ 0.83
CIRBP-238ENST00000592412 MED24O75448 989 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 XRCC6P12956 609 aaKnown RBP eCLIP20.21■□□□□ 0.83
CIRBP-238ENST00000592412 PPM1LQ5SGD2 360 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 LIN9Q5TKA1 542 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 EEF1DP3Q658K8 133 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 CD300LGQ6UXG3 332 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 RSPO2Q6UXX9 243 aaPredicted RBP20.21■□□□□ 0.83
CIRBP-238ENST00000592412 CATSPER3Q86XQ3 398 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 NECAB1Q8N987 351 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 SUMF1Q8NBK3 374 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 SLC7A14Q8TBB6 771 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 HCFC1R1Q9NWW0 138 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 MIA3Q5JRA6 1907 aa20.21■□□□□ 0.83
CIRBP-238ENST00000592412 KANSL1LA0AUZ9 987 aa20.2■□□□□ 0.82
CIRBP-238ENST00000592412 THP07101 528 aa20.2■□□□□ 0.82
CIRBP-238ENST00000592412 POU2F2P09086 479 aa20.2■□□□□ 0.82
CIRBP-238ENST00000592412 ZC3H14Q6PJT7 736 aaKnown RBP20.2■□□□□ 0.82
CIRBP-238ENST00000592412 NOSTRINQ8IVI9 506 aa20.2■□□□□ 0.82
CIRBP-238ENST00000592412 WASF1Q92558 559 aa20.2■□□□□ 0.82
CIRBP-238ENST00000592412 DNMT3BQ9UBC3 853 aaKnown RBP20.2■□□□□ 0.82
CIRBP-238ENST00000592412 EPG5Q9HCE0 2579 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 N4BP3O15049 544 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 RAB33AQ14088 237 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 MLF2Q15773 248 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-238ENST00000592412 ME3Q16798 604 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-238ENST00000592412 MTSS1LQ765P7 747 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 ZBTB8OSQ8IWT0 167 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 NPAS3Q8IXF0 933 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 DIS3L2Q8IYB7 885 aaKnown RBP20.19■□□□□ 0.82
CIRBP-238ENST00000592412 NSUN7Q8NE18 718 aaKnown RBP20.19■□□□□ 0.82
CIRBP-238ENST00000592412 MCPH1Q8NEM0 835 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 KXD1Q9BQD3 176 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 BRMS1Q9HCU9 246 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 MTRRQ9UBK8 725 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 POLIQ9UNA4 740 aa20.19■□□□□ 0.82
CIRBP-238ENST00000592412 JAK2O60674 1132 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 PRKCBP05771 671 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 ATP2B1P20020 1258 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 CD72P21854 359 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 FGFR3P22607 806 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 OR1D2P34982 312 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 PRPF4BQ13523 1007 aaKnown RBP20.18■□□□□ 0.82
CIRBP-238ENST00000592412 SLC44A4Q53GD3 710 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-238ENST00000592412 RUBCNQ92622 972 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 GTF3C6Q969F1 213 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 SHDQ96IW2 340 aa20.18■□□□□ 0.82
CIRBP-238ENST00000592412 PPP1R10Q96QC0 940 aaKnown RBP20.18■□□□□ 0.82
CIRBP-238ENST00000592412 SHISA7A6NL88 538 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 TMEM189-UBE2V1I3L0A0 370 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 ACKR2O00590 384 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 XYLBO75191 536 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 FOSBP53539 338 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 PRKCQQ04759 706 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 ELAVL2Q12926 359 aaKnown RBP20.17■□□□□ 0.82
CIRBP-238ENST00000592412 SLC5A9Q2M3M2 681 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 GLRA4Q5JXX5 417 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 C3orf58Q8NDZ4 430 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 ING5Q8WYH8 240 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 KIFC3Q9BVG8 833 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 C2orf40Q9H1Z8 148 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 TUFT1Q9NNX1 390 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 LTB4R2Q9NPC1 389 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 DLL3Q9NYJ7 618 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 GDAQ9Y2T3 454 aa20.17■□□□□ 0.82
CIRBP-238ENST00000592412 CLCNKBP51801 687 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 ST3GAL1Q11201 340 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 MAPK6Q16659 721 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 UVSSAQ2YD98 709 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 ZNF528Q3MIS6 628 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 PABPC1LQ4VXU2 614 aaKnown RBP20.16■□□□□ 0.82
CIRBP-238ENST00000592412 PDXDC1Q6P996 788 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 DGLUCYQ7Z3D6 616 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 DDX27Q96GQ7 796 aaKnown RBP20.16■□□□□ 0.82
CIRBP-238ENST00000592412 POLR3CQ9BUI4 534 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-238ENST00000592412 OSBPL6Q9BZF3 934 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 PLA2G2FQ9BZM2 168 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 GOLGA2P5Q9HBQ8 144 aa20.16■□□□□ 0.82
CIRBP-238ENST00000592412 POLD4Q9HCU8 107 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms