RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 RBM12Q9NTZ6 932 aaKnown RBP8.28□□□□□ -1.08
VAT1-209ENST00000592388 DACT1Q9NYF0 836 aa8.28□□□□□ -1.08
VAT1-209ENST00000592388 STK39Q9UEW8 545 aa8.28□□□□□ -1.08
VAT1-209ENST00000592388 SEPT9Q9UHD8 586 aaPredicted RBP8.28□□□□□ -1.08
VAT1-209ENST00000592388 PCDHA4Q9UN74 947 aa8.28□□□□□ -1.08
VAT1-209ENST00000592388 KCNJ14Q9UNX9 436 aa8.28□□□□□ -1.08
VAT1-209ENST00000592388 PRG3Q9Y2Y8 225 aaPredicted RBP8.28□□□□□ -1.08
VAT1-209ENST00000592388 HECTD1Q9ULT8 2610 aa8.28□□□□□ -1.08
VAT1-209ENST00000592388 SPAG17Q6Q759 2223 aa8.27□□□□□ -1.08
VAT1-209ENST00000592388 M0R2N6 131 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 CCL16O15467 120 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 ECI2O75521 394 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 RPP40O75818 363 aaKnown RBP8.27□□□□□ -1.09
VAT1-209ENST00000592388 PSMD10O75832 226 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 CCDC192P0DO97 292 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 RPL17P18621 184 aaKnown RBP8.27□□□□□ -1.09
VAT1-209ENST00000592388 PHKA2P46019 1235 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 GPC3P51654 580 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 SSRP1Q08945 709 aaKnown RBP8.27□□□□□ -1.09
VAT1-209ENST00000592388 SCRN1Q12765 414 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 INF2Q27J81 1249 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 UAP1L1Q3KQV9 507 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 PLA2G4FQ68DD2 849 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 TANGO2Q6ICL3 276 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 Q6ZS52 159 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 WDR5BQ86VZ2 330 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 NPAS3Q8IXF0 933 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 TRIM22Q8IYM9 498 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 BLIDQ8IZY5 108 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 ETNPPLQ8TBG4 499 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 DNASE1L2Q92874 299 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 MCRS1Q96EZ8 462 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 FAM167AQ96KS9 214 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 SCLT1Q96NL6 688 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 FAM193BQ96PV7 902 aaPredicted RBP8.27□□□□□ -1.09
VAT1-209ENST00000592388 MAP7D2Q96T17 732 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 BRD9Q9H8M2 597 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 SH3GLB2Q9NR46 395 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 BMP2KQ9NSY1 1161 aaPredicted RBP8.27□□□□□ -1.09
VAT1-209ENST00000592388 MARCH5Q9NX47 278 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 CEP131Q9UPN4 1083 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 PCDHGA5Q9Y5G8 931 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 RAI2Q9Y5P3 530 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 CYP46A1Q9Y6A2 500 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 ACACAQ13085 2346 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 CACNA1EQ15878 2313 aa8.27□□□□□ -1.09
VAT1-209ENST00000592388 LAMA1P25391 3075 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 SPAARA0A1B0GVQ0 90 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 LNP1A1A4G5 178 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 FAM205CA6NFA0 338 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 EML1O00423 815 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 CPLX1O14810 134 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 MAGEB2O15479 319 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 ARHGAP6O43182 974 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 STBD1O95210 358 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 PAPSS2O95340 614 aaPredicted RBP8.26□□□□□ -1.09
VAT1-209ENST00000592388 DEXIO95424 95 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 POMCP01189 267 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 DARSP14868 501 aaKnown RBP8.26□□□□□ -1.09
VAT1-209ENST00000592388 CCNE1P24864 410 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 USP11P51784 963 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 AFF1P51825 1210 aaKnown RBP8.26□□□□□ -1.09
VAT1-209ENST00000592388 JAK3P52333 1124 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 CREB5Q02930 508 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 TARBP2Q15633 366 aaKnown RBP8.26□□□□□ -1.09
VAT1-209ENST00000592388 Q4G0T1 1027 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 TWF2Q6IBS0 349 aaKnown RBP8.26□□□□□ -1.09
VAT1-209ENST00000592388 LILRA6Q6PI73 481 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 B3GNT9Q6UX72 402 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 MIER3Q7Z3K6 550 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 KSR1Q8IVT5 923 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 CHCHD4Q8N4Q1 142 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 GAB3Q8WWW8 586 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 NLRP7Q8WX94 980 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 CRELD1Q96HD1 420 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 CEP89Q96ST8 783 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 RIT2Q99578 217 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 TMEM9BQ9NQ34 198 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 HCFC1R1Q9NWW0 138 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 DDX25Q9UHL0 483 aaKnown RBP8.26□□□□□ -1.09
VAT1-209ENST00000592388 RAXQ9Y2V3 346 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 PIAS3Q9Y6X2 628 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 VWA8A3KMH1 1905 aa8.26□□□□□ -1.09
VAT1-209ENST00000592388 USP9XQ93008 2570 aaPredicted RBP8.25□□□□□ -1.09
VAT1-209ENST00000592388 APC2O95996 2303 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 A0A087WZ62 844 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 F8W810 466 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 CAVIN2O95810 425 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 TMOD1P28289 359 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 SFNP31947 248 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 OR1G1P47890 313 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 FOSBP53539 338 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 SIM1P81133 766 aaPredicted RBP8.25□□□□□ -1.09
VAT1-209ENST00000592388 DSG1Q02413 1049 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 PTGDRQ13258 359 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 EARS2Q5JPH6 523 aaKnown RBP8.25□□□□□ -1.09
VAT1-209ENST00000592388 PPM1LQ5SGD2 360 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 POTEHQ6S545 545 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 DAGLBQ8NCG7 672 aa8.25□□□□□ -1.09
VAT1-209ENST00000592388 MDM1Q8TC05 714 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms