RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 TOPORSQ9NS56 1045 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-213ENST00000592023 CCDC39Q9UFE4 941 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 KCNG1Q9UIX4 513 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 SSX2IPQ9Y2D8 614 aa16.65■□□□□ 0.26
ERCC1-213ENST00000592023 TRIP11Q15643 1979 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 FAM86C2PA6NEL3 165 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 PI4K2BG5E9Z4 385 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 H0YCG3 227 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 TEX28O15482 410 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 TOM1L1O75674 476 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 ADH1AP07327 375 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 MATR3P43243 847 aaKnown RBP eCLIP16.64■□□□□ 0.25
ERCC1-213ENST00000592023 SLC39A14Q15043 492 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 STK38Q15208 465 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 USP41Q3LFD5 358 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 SEZ6Q53EL9 994 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 KIAA0319Q5VV43 1072 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 CES5AQ6NT32 575 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 GLYCTKQ8IVS8 523 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 KRI1Q8N9T8 703 aaKnown RBP16.64■□□□□ 0.25
ERCC1-213ENST00000592023 SPRYD3Q8NCJ5 442 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 RIN2Q8WYP3 895 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-213ENST00000592023 SNX27Q96L92 541 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 FBXL18Q96ME1 805 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 PPP1R10Q96QC0 940 aaKnown RBP16.64■□□□□ 0.25
ERCC1-213ENST00000592023 ADAM7Q9H2U9 754 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 GOLGA2P5Q9HBQ8 144 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 STK17AQ9UEE5 414 aa16.64■□□□□ 0.25
ERCC1-213ENST00000592023 LOC730098B7Z3J9 87 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 DCXO43602 365 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 BRD1O95696 1058 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 MYBP10242 640 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 NASPP49321 788 aaPredicted RBP16.63■□□□□ 0.25
ERCC1-213ENST00000592023 ZNF131P52739 623 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 ITIH3Q06033 890 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 RTP2Q5QGT7 225 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 RRAGBQ5VZM2 374 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 PRSS55Q6UWB4 352 aaPredicted RBP16.63■□□□□ 0.25
ERCC1-213ENST00000592023 ZPBP2Q6X784 338 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 RNF135Q8IUD6 432 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 FEZF2Q8TBJ5 459 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 POMKQ9H5K3 350 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 SFXN1Q9H9B4 322 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 MAN1C1Q9NR34 630 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 CHST7Q9NS84 486 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 DAXXQ9UER7 740 aaPredicted RBP16.63■□□□□ 0.25
ERCC1-213ENST00000592023 MUTYHQ9UIF7 546 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 CITO14578 2027 aa16.63■□□□□ 0.25
ERCC1-213ENST00000592023 PDCD11Q14690 1871 aaKnown RBP16.63■□□□□ 0.25
ERCC1-213ENST00000592023 SMIM28A0A1B0GU29 152 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
ERCC1-213ENST00000592023 TRAK2O60296 914 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 GLUD1P00367 558 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 ALADP13716 330 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 DDIT3P35638 169 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 LIG4P49917 911 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 FOXD4L6Q3SYB3 417 aaPredicted RBP16.62■□□□□ 0.25
ERCC1-213ENST00000592023 FAM171A1Q5VUB5 890 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 TMC5Q6UXY8 1006 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
ERCC1-213ENST00000592023 DYMQ7RTS9 669 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 CEP57Q86XR8 500 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 RIPOR3Q96MK2 946 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 ZNF396Q96N95 335 aaPredicted RBP16.62■□□□□ 0.25
ERCC1-213ENST00000592023 ACAP3Q96P50 834 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 RXFP1Q9HBX9 757 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 C11orf16Q9NQ32 467 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 TSHZ2Q9NRE2 1034 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 MORC2Q9Y6X9 1032 aaPredicted RBP16.62■□□□□ 0.25
ERCC1-213ENST00000592023 DENND4AQ7Z401 1863 aa16.62■□□□□ 0.25
ERCC1-213ENST00000592023 VWA8A3KMH1 1905 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 CLDN3O15551 220 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 MEFVO15553 781 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-213ENST00000592023 B3GAT3O94766 335 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 RPL17P18621 184 aaKnown RBP16.61■□□□□ 0.25
ERCC1-213ENST00000592023 IGFBP6P24592 240 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-213ENST00000592023 NMT1P30419 496 aaKnown RBP16.61■□□□□ 0.25
ERCC1-213ENST00000592023 STAT6P42226 847 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 MTHFRP42898 656 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 CLCNKBP51801 687 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 SOX4Q06945 474 aaPredicted RBP16.61■□□□□ 0.25
ERCC1-213ENST00000592023 MCL1Q07820 350 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 TMEM31Q5JXX7 168 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 SFR1Q86XK3 245 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 LINC00301Q8NCQ3 95 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 UROC1Q96N76 676 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 ZMAT2Q96NC0 199 aaKnown RBP16.61■□□□□ 0.25
ERCC1-213ENST00000592023 NECTIN4Q96NY8 510 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 HAPLN2Q9GZV7 340 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.61■□□□□ 0.25
ERCC1-213ENST00000592023 CNTN3Q9P232 1028 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
ERCC1-213ENST00000592023 TBX20Q9UMR3 447 aa16.61■□□□□ 0.25
ERCC1-213ENST00000592023 C2orf16Q68DN1 1984 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 A0A087X0B3 334 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 TMEM189-UBE2V1I3L0A0 370 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 SPTLC2O15270 562 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 F13A1P00488 732 aa16.6■□□□□ 0.25
ERCC1-213ENST00000592023 ZSCAN22P10073 491 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms