RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 GLT1D1Q96MS3 346 aa12.33□□□□□ -0.44
TUBD1-211ENST00000591548 CGRRF1Q99675 332 aa12.33□□□□□ -0.44
TUBD1-211ENST00000591548 TRMT13Q9NUP7 481 aaKnown RBP12.33□□□□□ -0.44
TUBD1-211ENST00000591548 APEX2Q9UBZ4 518 aa12.33□□□□□ -0.44
TUBD1-211ENST00000591548 USP27XA6NNY8 438 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 CHRNA1P02708 482 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 STAG3L1P0CL83 205 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 JAM2P57087 298 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 CDK17Q00537 523 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 PTPN11Q06124 597 aaPredicted RBP12.32□□□□□ -0.44
TUBD1-211ENST00000591548 ZACNQ401N2 412 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 SLC9C1Q4G0N8 1177 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
TUBD1-211ENST00000591548 RSPH3Q86UC2 560 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 GPIHBP1Q8IV16 184 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 SLC43A3Q8NBI5 491 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 FBXL13Q8NEE6 735 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 OR5B17Q8NGF7 314 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 SYN2Q92777 582 aaPredicted RBP12.32□□□□□ -0.44
TUBD1-211ENST00000591548 NUCKS1Q9H1E3 243 aaKnown RBP12.32□□□□□ -0.44
TUBD1-211ENST00000591548 KCND1Q9NSA2 647 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 ZNHIT6Q9NWK9 470 aaKnown RBP12.32□□□□□ -0.44
TUBD1-211ENST00000591548 RAB20Q9NX57 234 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 DNAJC12Q9UKB3 198 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 NOC2LQ9Y3T9 749 aaKnown RBP12.32□□□□□ -0.44
TUBD1-211ENST00000591548 CDY2AQ9Y6F7 541 aa12.32□□□□□ -0.44
TUBD1-211ENST00000591548 VNN1O95497 513 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 PLEKP08567 350 aaPredicted RBP12.31□□□□□ -0.44
TUBD1-211ENST00000591548 CLTAP09496 248 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 CTSHP09668 335 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 CXCL8P10145 99 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 NCBP1Q09161 790 aaKnown RBP12.31□□□□□ -0.44
TUBD1-211ENST00000591548 MGAT3Q09327 533 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 SFMBT2Q5VUG0 894 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 HGSNATQ68CP4 663 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 SCARA3Q6AZY7 606 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 NOTUMQ6P988 496 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 SLC27A1Q6PCB7 646 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 WDR49Q8IV35 697 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 ARHGEF19Q8IW93 802 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 CCAR2Q8N163 923 aaKnown RBP12.31□□□□□ -0.44
TUBD1-211ENST00000591548 DHX38Q92620 1227 aaKnown RBP12.31□□□□□ -0.44
TUBD1-211ENST00000591548 FAM212AQ96EL1 285 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 DEFB118Q96PH6 123 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 ADPGKQ9BRR6 497 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 EIF2AQ9BY44 585 aaKnown RBP12.31□□□□□ -0.44
TUBD1-211ENST00000591548 SENP6Q9GZR1 1112 aaPredicted RBP12.31□□□□□ -0.44
TUBD1-211ENST00000591548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.31□□□□□ -0.44
TUBD1-211ENST00000591548 SPTLC3Q9NUV7 552 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 AIPL1Q9NZN9 384 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 ARHGAP20Q9P2F6 1191 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 TRPV2Q9Y5S1 764 aa12.31□□□□□ -0.44
TUBD1-211ENST00000591548 M0QZ92 97 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 B4GALT4O60513 344 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 NPTXRO95502 500 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 RPLP2P05387 115 aaKnown RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 CCL5P13501 91 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 AXLP30530 894 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 THPOP40225 353 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 POU5F1Q01860 360 aaKnown RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 PTK7Q13308 1070 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 RAPGEF1Q13905 1077 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 SURF1Q15526 300 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 KYAT1Q16773 422 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 TRIM71Q2Q1W2 868 aaKnown RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 SLC10A6Q3KNW5 377 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 DCAF4L1Q3SXM0 396 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 IRF2BP2Q7Z5L9 587 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 EFCAB13Q8IY85 973 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 ELMO3Q96BJ8 720 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 SPAG5Q96R06 1193 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 DESI2Q9BSY9 194 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 STK33Q9BYT3 514 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 OSBPL7Q9BZF2 842 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 GPR88Q9GZN0 384 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 TRPV6Q9H1D0 765 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 NHEJ1Q9H9Q4 299 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 RPF1Q9H9Y2 349 aaKnown RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 UBE2TQ9NPD8 197 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 STARD7Q9NQZ5 370 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 TRMT1Q9NXH9 659 aaKnown RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 MYO6Q9UM54 1294 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 PIN4Q9Y237 131 aaKnown RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 LACTBL1A8MY62 500 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 KBTBD13C9JR72 458 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 F8VZ95 297 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 DNM1LO00429 736 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 IL18RAPO95256 599 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 HLA-DRAP01903 254 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 PNMA6AP0CW24 399 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 RFX1P22670 979 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 GRM5P41594 1212 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 AP3M2P53677 418 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 BIRC3Q13489 604 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 DRAP1Q14919 205 aaPredicted RBP12.3□□□□□ -0.44
TUBD1-211ENST00000591548 UBXN11Q5T124 520 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 HELQQ8TDG4 1101 aa12.3□□□□□ -0.44
TUBD1-211ENST00000591548 KAT5Q92993 513 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms