RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 GPIHBP1Q8IV16 184 aa18.39■□□□□ 0.54
GCDH-212ENST00000590530 TMEM130Q8N3G9 435 aa18.39■□□□□ 0.54
GCDH-212ENST00000590530 ZNF516Q92618 1163 aa18.39■□□□□ 0.54
GCDH-212ENST00000590530 GCNT4Q9P109 453 aa18.39■□□□□ 0.54
GCDH-212ENST00000590530 MYO6Q9UM54 1294 aa18.39■□□□□ 0.54
GCDH-212ENST00000590530 EPN1Q9Y6I3 576 aaPredicted RBP18.39■□□□□ 0.54
GCDH-212ENST00000590530 A0A1B0GUA9 196 aa18.39■□□□□ 0.53
GCDH-212ENST00000590530 P4HA2O15460 535 aa18.39■□□□□ 0.53
GCDH-212ENST00000590530 ERLIN2O94905 339 aa18.39■□□□□ 0.53
GCDH-212ENST00000590530 POLR2FP61218 127 aaKnown RBP18.39■□□□□ 0.53
GCDH-212ENST00000590530 MGAT3Q09327 533 aa18.39■□□□□ 0.53
GCDH-212ENST00000590530 HSP90AA2PQ14568 343 aaPredicted RBP18.39■□□□□ 0.53
GCDH-212ENST00000590530 KLHDC7AQ5VTJ3 777 aa18.39■□□□□ 0.53
GCDH-212ENST00000590530 PRIMPOLQ96LW4 560 aa18.39■□□□□ 0.53
GCDH-212ENST00000590530 EIF2AQ9BY44 585 aaKnown RBP18.39■□□□□ 0.53
GCDH-212ENST00000590530 SENP6Q9GZR1 1112 aaPredicted RBP18.39■□□□□ 0.53
GCDH-212ENST00000590530 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.39■□□□□ 0.538e-7■■■■■ 298.1
GCDH-212ENST00000590530 RBAKQ9NYW8 714 aaPredicted RBP18.39■□□□□ 0.53
GCDH-212ENST00000590530 OGTO15294 1046 aa18.38■□□□□ 0.53
GCDH-212ENST00000590530 PMM2O15305 246 aa18.38■□□□□ 0.53
GCDH-212ENST00000590530 CYLC1P35663 651 aaPredicted RBP18.38■□□□□ 0.53
GCDH-212ENST00000590530 CTCFP49711 727 aaPredicted RBP18.38■□□□□ 0.53
GCDH-212ENST00000590530 MYL7Q01449 175 aa18.38■□□□□ 0.53
GCDH-212ENST00000590530 FAM228AQ86W67 206 aa18.38■□□□□ 0.53
GCDH-212ENST00000590530 TMEM117Q9H0C3 514 aa18.38■□□□□ 0.53
GCDH-212ENST00000590530 CXCL16Q9H2A7 254 aa18.38■□□□□ 0.53
GCDH-212ENST00000590530 SIX2Q9NPC8 291 aa18.38■□□□□ 0.53
GCDH-212ENST00000590530 CPSF3Q9UKF6 684 aaKnown RBP18.38■□□□□ 0.53
GCDH-212ENST00000590530 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 ARVCFO00192 962 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 UCHL3P15374 230 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 TERF1P54274 439 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 CDC42EP1Q00587 391 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 GJB7Q6PEY0 223 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 DIS3LQ8TF46 1054 aaKnown RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 U2AF1L4Q8WU68 220 aaKnown RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 AGO3Q9H9G7 860 aaKnown RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 NHEJ1Q9H9Q4 299 aaPredicted RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 AJAP1Q9UKB5 411 aaPredicted RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 NOD1Q9Y239 953 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 TRPV2Q9Y5S1 764 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 EIF3CLB5ME19 914 aaKnown RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 CDK7P50613 346 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 ATN1P54259 1190 aaPredicted RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 PTK7Q13308 1070 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 PSMD6Q15008 389 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 ENOX2Q16206 610 aaKnown RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 ZNF618Q5T7W0 954 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 SFMBT2Q5VUG0 894 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 TRIM65Q6PJ69 517 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 ACRBPQ8NEB7 543 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 TMC2Q8TDI7 906 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 FAM212AQ96EL1 285 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 EIF3CQ99613 913 aaKnown RBP18.37■□□□□ 0.53
GCDH-212ENST00000590530 KIAA1586Q9HCI6 787 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 NLRC4Q9NPP4 1024 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 HES2Q9Y543 173 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 PAXBP1Q9Y5B6 917 aa18.37■□□□□ 0.53
GCDH-212ENST00000590530 NPTXRO95502 500 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 ETF1P62495 437 aaKnown RBP18.36■□□□□ 0.53
GCDH-212ENST00000590530 PTPN11Q06124 597 aaPredicted RBP18.36■□□□□ 0.53
GCDH-212ENST00000590530 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
GCDH-212ENST00000590530 USP37Q86T82 979 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 RPAINQ86UA6 219 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 OR5B17Q8NGF7 314 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 LMO3Q8TAP4 145 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 SEMA4DQ92854 862 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 ARMC5Q96C12 935 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 CRISPLD2Q9H0B8 497 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 AIPL1Q9NZN9 384 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 ARHGAP20Q9P2F6 1191 aa18.36■□□□□ 0.53
GCDH-212ENST00000590530 PIN4Q9Y237 131 aaKnown RBP18.36■□□□□ 0.53
GCDH-212ENST00000590530 R3HCC1Q9Y3T6 440 aaKnown RBP18.36■□□□□ 0.53
GCDH-212ENST00000590530 SSU72P8A0A1W2PR75 194 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 SGPL1O95470 568 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 LDHAP00338 332 aaKnown RBP18.35■□□□□ 0.53
GCDH-212ENST00000590530 TFRCP02786 760 aaKnown RBP18.35■□□□□ 0.53
GCDH-212ENST00000590530 STAG3L1P0CL83 205 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 CXCL8P10145 99 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 RFX1P22670 979 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 KRT83P78385 493 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 TRAF7Q6Q0C0 670 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 ZNF662Q6ZS27 426 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 BRSK2Q8IWQ3 736 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 RNF19AQ9NV58 838 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 REXO2Q9Y3B8 237 aaKnown RBP18.35■□□□□ 0.53
GCDH-212ENST00000590530 FHOD1Q9Y613 1164 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 SERPING1P05155 500 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 MCF2P10911 925 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 GHRP10912 638 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 CETN1Q12798 172 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 UBXN11Q5T124 520 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 HGSNATQ68CP4 663 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 SV2AQ7L0J3 742 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 RSPH3Q86UC2 560 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 KIF18AQ8NI77 898 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 CCDC42Q96M95 316 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 INTS2Q9H0H0 1204 aaKnown RBP18.35■□□□□ 0.53
GCDH-212ENST00000590530 ST3GAL5Q9UNP4 418 aa18.35■□□□□ 0.53
GCDH-212ENST00000590530 M0QZ92 97 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms