RNA–Protein interactions for RNA: ENST00000590388.5

TUBB6-208, Transcript of tubulin beta 6 class V, human

TSL 4

Gene TUBB6, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB6-208	ENST00000590388	TMEM184A	Q6ZMB5	413 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	ZBTB33	Q86T24	672 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	CCDC65	Q8IXS2	484 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	GPR65	Q8IYL9	337 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	BICD1	Q96G01	975 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	CHAMP1	Q96JM3	812 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	ACAP3	Q96P50	834 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	C7orf25	Q9BPX7	421 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	HERC2P3	Q9BVR0	1158 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	COLEC11	Q9BWP8	271 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	MRPL44	Q9H9J2	332 aa	Known RBP	13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	CLDND1	Q9NY35	253 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	CNTN3	Q9P232	1028 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	KCNH3	Q9ULD8	1083 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	HPSE	Q9Y251	543 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	STYXL1	Q9Y6J8	313 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	VWA8	A3KMH1	1905 aa		13.64	□□□□□ -0.23
TUBB6-208	ENST00000590388	MUC3A	Q02505	3323 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388		A0A0B4J269	797 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	SMIM28	A0A1B0GU29	152 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	TMEM189-UBE2V1	I3L0A0	370 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	LINC01565	O15544	149 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	MEFV	O15553	781 aa	Predicted RBP	13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	LILRB3	O75022	631 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	CLTA	P09496	248 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	IDE	P14735	1019 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	PTPN14	Q15678	1187 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	PUS10	Q3MIT2	529 aa	Known RBP	13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	MSLNL	Q96KJ4	702 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	CHST7	Q9NS84	486 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	PANK4	Q9NVE7	773 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388	ADAM28	Q9UKQ2	775 aa		13.63	□□□□□ -0.23
TUBB6-208	ENST00000590388		A0A1W2PQ27	194 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388		A0A1W2PQ64	194 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388		A0A1W2PQD8	194 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	TTC26	A0AVF1	554 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388		F8W810	466 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	OGT	O15294	1046 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	ACTN4	O43707	911 aa	Known RBP	13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	CXCL14	O95715	111 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	ADRB2	P07550	413 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	SLFN14	P0C7P3	912 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	HARS	P12081	509 aa	Known RBP	13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	PFKFB1	P16118	471 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	KCNQ1	P51787	676 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	CASP5	P51878	434 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	POU5F1	Q01860	360 aa	Known RBP	13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	DLX2	Q07687	328 aa	Predicted RBP	13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	EHHADH	Q08426	723 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	COASY	Q13057	564 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	SLC10A6	Q3KNW5	377 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	GLRA4	Q5JXX5	417 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	L1TD1	Q5T7N2	865 aa	Known RBP	13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	SLFN12L	Q6IEE8	588 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	FUT10	Q6P4F1	479 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	RBM23	Q86U06	439 aa	Known RBP	13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	VN1R2	Q8NFZ6	395 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	STAM	Q92783	540 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	UROC1	Q96N76	676 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	ZMAT2	Q96NC0	199 aa	Known RBP	13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	PAAF1	Q9BRP4	392 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	IGFLR1	Q9H665	355 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	PLEKHA5	Q9HAU0	1116 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	SLC38A7	Q9NVC3	462 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	USP25	Q9UHP3	1055 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	PCDHB13	Q9Y5F0	798 aa		13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.62	□□□□□ -0.23
TUBB6-208	ENST00000590388	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	9e-7	■■■■■ 44.8
TUBB6-208	ENST00000590388	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	CASTOR2	A6NHX0	329 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	ANKRD63	C9JTQ0	380 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388		H3BQ06	376 aa	Predicted RBP	13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	PER2	O15055	1255 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	CLASP2	O75122	1294 aa	Known RBP	13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	KIF4A	O95239	1232 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	GCNT3	O95395	438 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	NDUFV1	P49821	464 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	OSTN	P61366	133 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	ASIC1	P78348	528 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	DSG1	Q02413	1049 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	UPP1	Q16831	310 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	KIAA0319	Q5VV43	1072 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	UNC13D	Q70J99	1090 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	ACCS	Q96QU6	501 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	TSPAN18	Q96SJ8	248 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	FGFBP2	Q9BYJ0	223 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	GPR62	Q9BZJ7	368 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	CLEC1B	Q9P126	229 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	CACNG4	Q9UBN1	327 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	EXOC7	Q9UPT5	735 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	SSX2IP	Q9Y2D8	614 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	PLXNA3	P51805	1871 aa		13.61	□□□□□ -0.23
TUBB6-208	ENST00000590388	C5orf42	Q9H799	3197 aa		13.6	□□□□□ -0.23

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