RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 PON1P27169 355 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 CALML3P27482 149 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 CDK7P50613 346 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 HIRAP54198 1017 aaPredicted RBP16.15■□□□□ 0.18
CIRBP-228ENST00000590347 NAPAP54920 295 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 ADARP55265 1226 aaKnown RBP16.15■□□□□ 0.18
CIRBP-228ENST00000590347 SH3D19Q5HYK7 790 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 PHLDB3Q6NSJ2 640 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 SLFN11Q7Z7L1 901 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 TBCKQ8TEA7 893 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 C10orf82Q8WW14 230 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 FAM192AQ9GZU8 254 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 PPM1HQ9ULR3 514 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 PCDHB13Q9Y5F0 798 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 DOT1LQ8TEK3 1739 aa16.15■□□□□ 0.18
CIRBP-228ENST00000590347 ZNF862O60290 1169 aa16.14■□□□□ 0.18
CIRBP-228ENST00000590347 VCAM1P19320 739 aa16.14■□□□□ 0.18
CIRBP-228ENST00000590347 PAX3P23760 479 aa16.14■□□□□ 0.18
CIRBP-228ENST00000590347 COG7P83436 770 aa16.14■□□□□ 0.18
CIRBP-228ENST00000590347 MOGSQ13724 837 aa16.14■□□□□ 0.18
CIRBP-228ENST00000590347 SYCE1Q8N0S2 351 aa16.14■□□□□ 0.18
CIRBP-228ENST00000590347 SYN2Q92777 582 aaPredicted RBP16.14■□□□□ 0.18
CIRBP-228ENST00000590347 FAM187AA6NFU0 413 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 SLC37A4O43826 429 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 HPCAP84074 193 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 KBTBD12Q3ZCT8 623 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 MFSD5Q6N075 450 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 DPY19L2Q6NUT2 758 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 BTNL9Q6UXG8 535 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 TAB3Q8N5C8 712 aaPredicted RBP16.14■□□□□ 0.17
CIRBP-228ENST00000590347 USP6NLQ92738 828 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 ZNF652Q9Y2D9 606 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 USP17L3A6NCW0 530 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 USP17L4A6NCW7 530 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 CLDN3O15551 220 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 CYTH3O43739 400 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 DNAJC6O75061 913 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 KRT17Q04695 432 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 MAP7Q14244 749 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 DAB2IPQ5VWQ8 1189 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 USP17L1Q7RTZ2 530 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 APLFQ8IW19 511 aaPredicted RBP16.14■□□□□ 0.17
CIRBP-228ENST00000590347 EFCAB3Q8N7B9 438 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 PFDN4Q9NQP4 134 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 INIPQ9NRY2 104 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 GCNT4Q9P109 453 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 STX8Q9UNK0 236 aa16.14■□□□□ 0.17
CIRBP-228ENST00000590347 FAM47DPA6NHR8 397 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 DCTN3O75935 186 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 ALDH1B1P30837 517 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 PGM1P36871 562 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 PKN2Q16513 984 aaKnown RBP16.13■□□□□ 0.17
CIRBP-228ENST00000590347 RBM44Q6ZP01 1051 aaKnown RBP16.13■□□□□ 0.17
CIRBP-228ENST00000590347 PYDC1Q8WXC3 89 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 TAS2R1Q9NYW7 299 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 LRP6O75581 1613 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 AKAP11Q9UKA4 1901 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 MYH14Q7Z406 1995 aaKnown RBP16.13■□□□□ 0.17
CIRBP-228ENST00000590347 A0A1W2PPM1 405 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 KRT18P05783 430 aaKnown RBP16.13■□□□□ 0.17
CIRBP-228ENST00000590347 UQCRFS1P1P0C7P4 283 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 ITGA8P53708 1063 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 CDC16Q13042 620 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 DHX34Q14147 1143 aaKnown RBP16.13■□□□□ 0.17
CIRBP-228ENST00000590347 ZRSR2Q15696 482 aaKnown RBP16.13■□□□□ 0.17
CIRBP-228ENST00000590347 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 EDEM3Q9BZQ6 932 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 LIN28AQ9H9Z2 209 aaKnown RBP16.13■□□□□ 0.17
CIRBP-228ENST00000590347 NINJ2Q9NZG7 142 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 PCDHGB4Q9UN71 923 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 PCDHGB5Q9Y5G0 923 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 COMMD3-BMI1R4GMX3 469 aa16.13■□□□□ 0.17
CIRBP-228ENST00000590347 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 TRIM43BA6NCK2 446 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 H3BRJ5 948 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 MARCH6O60337 910 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 ATP5HO75947 161 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 TFPTP0C1Z6 253 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 VARSP26640 1264 aaKnown RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 PSMD7P51665 324 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 DSG1Q02413 1049 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 KDSRQ06136 332 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 LRRC8BQ6P9F7 803 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 VPS36Q86VN1 386 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 ST13P4Q8IZP2 240 aaPredicted RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 ELMO3Q96BJ8 720 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 ECSITQ9BQ95 431 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 BTBD10Q9BSF8 475 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 SYNCQ9H7C4 482 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 PCDHA3Q9Y5H8 950 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 PNPLA7Q6ZV29 1317 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 HAUS5O94927 633 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 ALOX15P16050 662 aaPredicted RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 ZNF24P17028 368 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 COILP38432 576 aaPredicted RBP16.12■□□□□ 0.17
CIRBP-228ENST00000590347 RASSF3Q86WH2 238 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 TRIM50Q86XT4 487 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 DYNLL2Q96FJ2 89 aa16.12■□□□□ 0.17
CIRBP-228ENST00000590347 SERPINB12Q96P63 405 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms