RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 NCKAP1LP55160 1127 aa22.57■■□□□ 1.2
CIRBP-226ENST00000590171 CEBPZQ03701 1054 aaKnown RBP22.57■■□□□ 1.2
CIRBP-226ENST00000590171 STRN3Q13033 797 aa22.57■■□□□ 1.2
CIRBP-226ENST00000590171 TMC5Q6UXY8 1006 aa22.57■■□□□ 1.2
CIRBP-226ENST00000590171 RIN2Q8WYP3 895 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-226ENST00000590171 SNX21Q969T3 373 aa22.57■■□□□ 1.2
CIRBP-226ENST00000590171 EPSTI1Q96J88 318 aa22.57■■□□□ 1.2
CIRBP-226ENST00000590171 ZBTB45Q96K62 511 aaPredicted RBP22.57■■□□□ 1.2
CIRBP-226ENST00000590171 RIPOR3Q96MK2 946 aa22.57■■□□□ 1.2
CIRBP-226ENST00000590171 TCHPQ9BT92 498 aa22.57■■□□□ 1.2
CIRBP-226ENST00000590171 SPDYE4A6NLX3 237 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 PRR33A8MZF0 331 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 STX6O43752 255 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 HARSP12081 509 aaKnown RBP22.56■■□□□ 1.2
CIRBP-226ENST00000590171 YARSP54577 528 aaKnown RBP22.56■■□□□ 1.2
CIRBP-226ENST00000590171 XKR4Q5GH76 650 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 RTP2Q5QGT7 225 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 ALKAL1Q6UXT8 129 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 GPR65Q8IYL9 337 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 LARP4BQ92615 738 aaKnown RBP22.56■■□□□ 1.2
CIRBP-226ENST00000590171 USP28Q96RU2 1077 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 MAN1C1Q9NR34 630 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 TOPORSQ9NS56 1045 aaPredicted RBP22.56■■□□□ 1.2
CIRBP-226ENST00000590171 ANKFY1Q9P2R3 1169 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 SRPRBQ9Y5M8 271 aaKnown RBP22.56■■□□□ 1.2
CIRBP-226ENST00000590171 GTF3C3Q9Y5Q9 886 aa22.56■■□□□ 1.2
CIRBP-226ENST00000590171 SMIM28A0A1B0GU29 152 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 TOM1L1O75674 476 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 GLUD1P00367 558 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 IGFBP6P24592 240 aaPredicted RBP22.55■■□□□ 1.2
CIRBP-226ENST00000590171 ZNF131P52739 623 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 ATAT1Q5SQI0 421 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 ZPBP2Q6X784 338 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 HAUS6Q7Z4H7 955 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 GPR149Q86SP6 731 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 KCNN1Q92952 543 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 SNX27Q96L92 541 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 CLIC6Q96NY7 704 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 GOLGA2P5Q9HBQ8 144 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 TSHZ2Q9NRE2 1034 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.55■■□□□ 1.23e-7■■□□□ 13.8
CIRBP-226ENST00000590171 FNIP2Q9P278 1114 aa22.55■■□□□ 1.2
CIRBP-226ENST00000590171 TMEM189-UBE2V1I3L0A0 370 aa22.54■■□□□ 1.2
CIRBP-226ENST00000590171 MEFVO15553 781 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-226ENST00000590171 FAM13AO94988 1023 aa22.54■■□□□ 1.2
CIRBP-226ENST00000590171 RPL17P18621 184 aaKnown RBP22.54■■□□□ 1.2
CIRBP-226ENST00000590171 CLCNKBP51801 687 aa22.54■■□□□ 1.2
CIRBP-226ENST00000590171 SOX4Q06945 474 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-226ENST00000590171 FAM171A1Q5VUB5 890 aa22.54■■□□□ 1.2
CIRBP-226ENST00000590171 PRSS55Q6UWB4 352 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-226ENST00000590171 GLYCTKQ8IVS8 523 aa22.54■■□□□ 1.2
CIRBP-226ENST00000590171 ZMAT2Q96NC0 199 aaKnown RBP22.54■■□□□ 1.2
CIRBP-226ENST00000590171 ACAP3Q96P50 834 aa22.54■■□□□ 1.2
CIRBP-226ENST00000590171 ZSCAN16Q9H4T2 348 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-226ENST00000590171 NR2E1Q9Y466 385 aa22.54■■□□□ 1.2
CIRBP-226ENST00000590171 C2CD4DB7Z1M9 353 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 H0YCG3 227 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 KRT18P05783 430 aaKnown RBP22.53■■□□□ 1.2
CIRBP-226ENST00000590171 MYBP10242 640 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 DDIT3P35638 169 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 NOLC1Q14978 699 aaKnown RBP eCLIP22.53■■□□□ 1.2
CIRBP-226ENST00000590171 SEZ6Q53EL9 994 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 CEP57Q86XR8 500 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 PALB2Q86YC2 1186 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 MYCT1Q8N699 235 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 PIK3R5Q8WYR1 880 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 EDAQ92838 391 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 UROC1Q96N76 676 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 TTPALQ9BTX7 342 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 HAPLN2Q9GZV7 340 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 PARVGQ9HBI0 331 aa22.53■■□□□ 1.2
CIRBP-226ENST00000590171 PLXNA3P51805 1871 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 K7ENM7 598 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 TGM5O43548 720 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 B3GAT3O94766 335 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 SPATA31D3P0C874 917 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 CREMQ03060 361 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 MCL1Q07820 350 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 SLC39A14Q15043 492 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 UPP1Q16831 310 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 CD300LGQ6UXG3 332 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 C15orf39Q6ZRI6 1047 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 SPATA31D4Q6ZUB0 917 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 C3orf58Q8NDZ4 430 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 LNX1Q8TBB1 728 aaPredicted RBP22.52■■□□□ 1.2
CIRBP-226ENST00000590171 FIZ1Q96SL8 496 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 ZHX3Q9H4I2 956 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 CNTN3Q9P232 1028 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 CCDC39Q9UFE4 941 aa22.52■■□□□ 1.2
CIRBP-226ENST00000590171 MORC2Q9Y6X9 1032 aaPredicted RBP22.52■■□□□ 1.2
CIRBP-226ENST00000590171 CLDN3O15551 220 aa22.51■■□□□ 1.19
CIRBP-226ENST00000590171 TRAK2O60296 914 aa22.51■■□□□ 1.19
CIRBP-226ENST00000590171 TBCAO75347 108 aaKnown RBP22.51■■□□□ 1.19
CIRBP-226ENST00000590171 KCNE1P15382 129 aa22.51■■□□□ 1.19
CIRBP-226ENST00000590171 ELAVL2Q12926 359 aaKnown RBP22.51■■□□□ 1.19
CIRBP-226ENST00000590171 LILRA6Q6PI73 481 aa22.51■■□□□ 1.19
CIRBP-226ENST00000590171 DCLRE1AQ6PJP8 1040 aa22.51■■□□□ 1.19
CIRBP-226ENST00000590171 HSCBQ8IWL3 235 aa22.51■■□□□ 1.19
CIRBP-226ENST00000590171 CMASQ8NFW8 434 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-226ENST00000590171 BICD1Q96G01 975 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms