RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 PHOX2BQ99453 314 aa18.51■□□□□ 0.55
CROCCP3-203ENST00000589964 CLSTN3Q9BQT9 956 aa18.51■□□□□ 0.55
CROCCP3-203ENST00000589964 IKZF4Q9H2S9 585 aa18.51■□□□□ 0.55
CROCCP3-203ENST00000589964 KMT5AQ9NQR1 393 aa18.51■□□□□ 0.55
CROCCP3-203ENST00000589964 CCDC195A0A1B0GUA6 201 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 VPS37CA5D8V6 355 aaPredicted RBP18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 TADA2AO75478 443 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 GLUD1P00367 558 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 ADH1AP07327 375 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 BRCC3P46736 316 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 CLCNKBP51801 687 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 NTHL1P78549 312 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 RESTQ13127 1097 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 DMP1Q13316 513 aaPredicted RBP18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 DHX8Q14562 1220 aaKnown RBP18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 BMS1Q14692 1282 aaKnown RBP18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 SF3A1Q15459 793 aaKnown RBP18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 DCAF4L1Q3SXM0 396 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 ATAT1Q5SQI0 421 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 ALKAL1Q6UXT8 129 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 PPFIBP1Q86W92 1011 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 CEP57Q86XR8 500 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 TDRD5Q8NAT2 981 aaKnown RBP18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 LNX1Q8TBB1 728 aaPredicted RBP18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 RSAD2Q8WXG1 361 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 PBXIP1Q96AQ6 731 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 NECTIN4Q96NY8 510 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 MYADMQ96S97 322 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 RAB34Q9BZG1 259 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 KIF3AQ9Y496 699 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 DOCK8Q8NF50 2099 aa18.5■□□□□ 0.55
CROCCP3-203ENST00000589964 SMIM28A0A1B0GU29 152 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 MAPTP10636 758 aaKnown RBP18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 PLCG1P19174 1290 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 GRM5P41594 1212 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 SIGLEC14Q08ET2 396 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 MCM6Q14566 821 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 PTPAQ15257 358 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 USP41Q3LFD5 358 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 SNX27Q96L92 541 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 REEP2Q9BRK0 252 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 ADPGKQ9BRR6 497 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 BACH2Q9BYV9 841 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 TMEM134Q9H6X4 195 aa18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 SF3B1O75533 1304 aaKnown RBP eCLIP18.49■□□□□ 0.55
CROCCP3-203ENST00000589964 CARNS1A5YM72 827 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 SPDYE4A6NLX3 237 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 PLS3P13797 630 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 TKTP29401 623 aaKnown RBP18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 MCM2P49736 904 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 SPAG1Q07617 926 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 XKR4Q5GH76 650 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 GPBP1Q86WP2 473 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 PIK3R5Q8WYR1 880 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 EPSTI1Q96J88 318 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 DRC1Q96MC2 740 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 MRPL4Q9BYD3 311 aaKnown RBP18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 ANKFY1Q9P2R3 1169 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 NR2E1Q9Y466 385 aa18.48■□□□□ 0.55
CROCCP3-203ENST00000589964 TISP43B9A030 160 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 NRG2O14511 850 aaPredicted RBP18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 NARSO43776 548 aaKnown RBP18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 MARCKSP29966 332 aaPredicted RBP18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 TNFSF9P41273 254 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 GUCY2FP51841 1108 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 PSMD5Q16401 504 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 UPP1Q16831 310 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 ARL6IP4Q66PJ3 421 aaKnown RBP18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 SLC39A4Q6P5W5 647 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 BMP8AQ7Z5Y6 402 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 ZDHHC14Q8IZN3 488 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 CMASQ8NFW8 434 aaPredicted RBP18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 SMG7Q92540 1137 aaKnown RBP18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 CLIC6Q96NY7 704 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 FIZ1Q96SL8 496 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 TTPALQ9BTX7 342 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 FNIP2Q9P278 1114 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 TUBGCP4Q9UGJ1 667 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 COL4A3Q01955 1670 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 PIEZO1Q92508 2521 aa18.47■□□□□ 0.55
CROCCP3-203ENST00000589964 MYH11P35749 1972 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 NR1I2O75469 434 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 B3GAT3O94766 335 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 FGFR3P22607 806 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 NHLH1Q02575 133 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 SLC10A6Q3KNW5 377 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 POTEHQ6S545 545 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 MPZL3Q6UWV2 235 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 CCDC149Q6ZUS6 474 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 SPIRE2Q8WWL2 714 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 DDX27Q96GQ7 796 aaKnown RBP18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 NTPCRQ9BSD7 190 aaKnown RBP18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 NT5C3AQ9H0P0 336 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 FBXO2Q9UK22 296 aaPredicted RBP18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 FBXW11Q9UKB1 542 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 CACNA1HO95180 2353 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 CLUHO75153 1309 aa18.46■□□□□ 0.55
CROCCP3-203ENST00000589964 A0A087X0B3 334 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms