RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	RPS6KC1	Q96S38	1066 aa		18.95	■□□□□ 0.62
MBD1-221	ENST00000589867	GPR62	Q9BZJ7	368 aa		18.95	■□□□□ 0.62
MBD1-221	ENST00000589867	TRIM9	Q9C026	710 aa		18.95	■□□□□ 0.62
MBD1-221	ENST00000589867	TNMD	Q9H2S6	317 aa		18.95	■□□□□ 0.62
MBD1-221	ENST00000589867	ANKFY1	Q9P2R3	1169 aa		18.95	■□□□□ 0.62
MBD1-221	ENST00000589867	SMIM28	A0A1B0GU29	152 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	CASTOR2	A6NHX0	329 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	POLR2D	O15514	142 aa	Known RBP	18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	CLASP2	O75122	1294 aa	Known RBP	18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	TH	P07101	528 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	HARS	P12081	509 aa	Known RBP	18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	SMC1A	Q14683	1233 aa	Known RBP	18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	AAK1	Q2M2I8	961 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	CNNM4	Q6P4Q7	775 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	TMEM184A	Q6ZMB5	413 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	GLIS3	Q8NEA6	775 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	ADAMTS19	Q8TE59	1207 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	TCHP	Q9BT92	498 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	HERC2P3	Q9BVR0	1158 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	TBC1D7	Q9P0N9	293 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	BARX2	Q9UMQ3	279 aa	Predicted RBP	18.94	■□□□□ 0.62
MBD1-221	ENST00000589867	ANK1	P16157	1881 aa		18.94	■□□□□ 0.62
MBD1-221	ENST00000589867		A0A0B4J269	797 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	GRXCR2	A6NFK2	248 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	DLL1	O00548	723 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	KIF4A	O95239	1232 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	SOD2	P04179	222 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	IL9	P15248	144 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	CASP1	P29466	404 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	TNFSF9	P41273	254 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	CLUL1	Q15846	466 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	KIAA0319	Q5VV43	1072 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	EP400NL	Q6ZTU2	488 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	FEZF2	Q8TBJ5	459 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	HPS3	Q969F9	1004 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	ACAP3	Q96P50	834 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	CDCA3	Q99618	268 aa	Predicted RBP	18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	CCDC94	Q9BW85	323 aa	Predicted RBP	18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	CUEDC2	Q9H467	287 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	GOLGA2P5	Q9HBQ8	144 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	OLFML3	Q9NRN5	406 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	CHST7	Q9NS84	486 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	CNTN3	Q9P232	1028 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	SEL1L	Q9UBV2	794 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	HPSE	Q9Y251	543 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	STYXL1	Q9Y6J8	313 aa		18.93	■□□□□ 0.62
MBD1-221	ENST00000589867	CLDN3	O15551	220 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	ADRB2	P07550	413 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	MYB	P10242	640 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	KCNE1	P15382	129 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	GAP43	P17677	238 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	SCP2	P22307	547 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	ADSS	P30520	456 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	KRT85	P78386	507 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	EHHADH	Q08426	723 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	COASY	Q13057	564 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	FUT10	Q6P4F1	479 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	IQUB	Q8NA54	791 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	SLC22A17	Q8WUG5	538 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	PPP2R3C	Q969Q6	453 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	B3GALT6	Q96L58	329 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	SPATA32	Q96LK8	384 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	C7orf25	Q9BPX7	421 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	COLEC11	Q9BWP8	271 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	PANK4	Q9NVE7	773 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	ADAM28	Q9UKQ2	775 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	KCNH3	Q9ULD8	1083 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	HCFC2	Q9Y5Z7	792 aa		18.92	■□□□□ 0.62
MBD1-221	ENST00000589867	PLXNA3	P51805	1871 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	FAM237A	A0A1B0GTK4	181 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	TTC26	A0AVF1	554 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	HNRNPDL	O14979	420 aa	Known RBP	18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	MBTPS2	O43462	519 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	ACTN4	O43707	911 aa	Known RBP	18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	CNP	P09543	421 aa	Known RBP	18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	CXCL8	P10145	99 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	IDE	P14735	1019 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	CMA1	P23946	247 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	HOXD13	P35453	343 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	LIG4	P49917	911 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	ENOX2	Q16206	610 aa	Known RBP	18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	HERC4	Q5GLZ8	1057 aa	Predicted RBP	18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	ADAL	Q6DHV7	355 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	SYCE2	Q6PIF2	218 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	SMRP1	Q8NCR6	262 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	C3orf58	Q8NDZ4	430 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	HASPIN	Q8TF76	798 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	C18orf25	Q96B23	403 aa	Predicted RBP	18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	BICD1	Q96G01	975 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	KLHL5	Q96PQ7	755 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	S1PR5	Q9H228	398 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	MRPL44	Q9H9J2	332 aa	Known RBP	18.91	■□□□□ 0.62
MBD1-221	ENST00000589867	GDPD2	Q9HCC8	539 aa		18.91	■□□□□ 0.62
MBD1-221	ENST00000589867		A0A1B0GVL5	298 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	PFKFB1	P16118	471 aa		18.9	■□□□□ 0.62
MBD1-221	ENST00000589867	NDUFV1	P49821	464 aa		18.9	■□□□□ 0.62

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