RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SPIRE1Q08AE8 756 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 ZBTB41Q5SVQ8 909 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 ZBTB8OSQ8IWT0 167 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 MAML2Q8IZL2 1156 aaPredicted RBP16.86■□□□□ 0.29
ACTN4-211ENST00000589528 GPR161Q8N6U8 529 aaKnown RBP16.86■□□□□ 0.29
ACTN4-211ENST00000589528 ADPGKQ9BRR6 497 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 OSBPL6Q9BZF3 934 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 BRMS1Q9HCU9 246 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 PRMT7Q9NVM4 692 aaPredicted RBP16.86■□□□□ 0.29
ACTN4-211ENST00000589528 DLL3Q9NYJ7 618 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 PCDHGA2Q9Y5H1 932 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 COL4A3Q01955 1670 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 CD72P21854 359 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 RARRES1P49788 294 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 CALCRLQ16602 461 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 PABPC1LQ4VXU2 614 aaKnown RBP16.85■□□□□ 0.29
ACTN4-211ENST00000589528 AXDND1Q5T1B0 1012 aaPredicted RBP16.85■□□□□ 0.29
ACTN4-211ENST00000589528 RSPO2Q6UXX9 243 aaPredicted RBP16.85■□□□□ 0.29
ACTN4-211ENST00000589528 MAEAQ7L5Y9 396 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 ITFG1Q8TB96 612 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 LNX1Q8TBB1 728 aaPredicted RBP16.85■□□□□ 0.29
ACTN4-211ENST00000589528 OXER1Q8TDS5 423 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 PRIMPOLQ96LW4 560 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 LTB4R2Q9NPC1 389 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 PDRG1Q9NUG6 133 aa16.85■□□□□ 0.29
ACTN4-211ENST00000589528 MTF2Q9Y483 593 aaPredicted RBP16.85■□□□□ 0.29
ACTN4-211ENST00000589528 NOTCH4Q99466 2003 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 N4BP3O15049 544 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 LYPLA2O95372 231 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 OR1D2P34982 312 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 UVSSAQ2YD98 709 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 TPRG1Q6ZUI0 275 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 PIGOQ8TEQ8 1089 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 ING5Q8WYH8 240 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 WASF1Q92558 559 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 DDX23Q9BUQ8 820 aaKnown RBP16.84■□□□□ 0.29
ACTN4-211ENST00000589528 TTC12Q9H892 705 aaPredicted RBP16.84■□□□□ 0.29
ACTN4-211ENST00000589528 SNTG2Q9NY99 539 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 MRPS17Q9Y2R5 130 aaKnown RBP16.84■□□□□ 0.29
ACTN4-211ENST00000589528 GPR179Q6PRD1 2367 aa16.84■□□□□ 0.29
ACTN4-211ENST00000589528 LIG1P18858 919 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 KRT2P35908 639 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 SCRN1Q12765 414 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.83■□□□□ 0.28
ACTN4-211ENST00000589528 ZNF852Q6ZMS4 543 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 NELL2Q99435 816 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 HSD17B14Q9BPX1 270 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 STK36Q9NRP7 1315 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 GJB4Q9NTQ9 266 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 HCFC1R1Q9NWW0 138 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 ZSCAN32Q9NX65 697 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 CDV3Q9UKY7 258 aaKnown RBP16.83■□□□□ 0.28
ACTN4-211ENST00000589528 KCNH3Q9ULD8 1083 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 SMG5Q9UPR3 1016 aaKnown RBP16.83■□□□□ 0.28
ACTN4-211ENST00000589528 MRPS23Q9Y3D9 190 aaKnown RBP16.83■□□□□ 0.28
ACTN4-211ENST00000589528 NCOR2Q9Y618 2525 aa16.83■□□□□ 0.28
ACTN4-211ENST00000589528 TPRP12270 2363 aaKnown RBP16.82■□□□□ 0.28
ACTN4-211ENST00000589528 RECQL4O94761 1208 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 ATP2B1P20020 1258 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 TXKP42681 527 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 PRPF4BQ13523 1007 aaKnown RBP16.82■□□□□ 0.28
ACTN4-211ENST00000589528 EARS2Q5JPH6 523 aaKnown RBP16.82■□□□□ 0.28
ACTN4-211ENST00000589528 NPAS3Q8IXF0 933 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 MCPH1Q8NEM0 835 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 TM6SF1Q9BZW5 370 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 C2orf40Q9H1Z8 148 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 GPRC5CQ9NQ84 441 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 GMEB2Q9UKD1 530 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 USP18Q9UMW8 372 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 SPTBN2O15020 2390 aa16.82■□□□□ 0.28
ACTN4-211ENST00000589528 RALGAPA1Q6GYQ0 2036 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 FAM205CA6NFA0 338 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 PRR5-ARHGAP8B1AHC4 643 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 PTGESO14684 152 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 ADAM12O43184 909 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 NEMFO60524 1076 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 B3GAT3O94766 335 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 POU2F2P09086 479 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 ARHGAP8P85298 464 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 LMNB2Q03252 620 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 NR5A1Q13285 461 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 RAB33AQ14088 237 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 MAPK6Q16659 721 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 MCRS1Q96EZ8 462 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 CNTNAP3BQ96NU0 1288 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 CNTNAP3Q9BZ76 1288 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 PDZD7Q9H5P4 517 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 DNMT3BQ9UBC3 853 aaKnown RBP16.81■□□□□ 0.28
ACTN4-211ENST00000589528 ORC3Q9UBD5 711 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-211ENST00000589528 RAB23Q9ULC3 237 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 GDAQ9Y2T3 454 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 CDY1Q9Y6F8 540 aa16.81■□□□□ 0.28
ACTN4-211ENST00000589528 A0A087WWV3 80 aa16.8■□□□□ 0.28
ACTN4-211ENST00000589528 EPB41L2O43491 1005 aaKnown RBP16.8■□□□□ 0.28
ACTN4-211ENST00000589528 TRAPPC3O43617 180 aa16.8■□□□□ 0.28
ACTN4-211ENST00000589528 ECI2O75521 394 aa16.8■□□□□ 0.28
ACTN4-211ENST00000589528 LRG1P02750 347 aa16.8■□□□□ 0.28
ACTN4-211ENST00000589528 PRKCBP05771 671 aa16.8■□□□□ 0.28
ACTN4-211ENST00000589528 RHOP08100 348 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms