RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 KIAA1586Q9HCI6 787 aa21.77■■□□□ 1.08
DNMT1-216ENST00000588952 MIOSQ9NXC5 875 aa21.77■■□□□ 1.08
DNMT1-216ENST00000588952 LRFN2Q9ULH4 789 aa21.77■■□□□ 1.08
DNMT1-216ENST00000588952 FRMD4BQ9Y2L6 1034 aa21.77■■□□□ 1.08
DNMT1-216ENST00000588952 GIT1Q9Y2X7 761 aa21.77■■□□□ 1.08
DNMT1-216ENST00000588952 PDE4DIPQ5VU43 2346 aa21.77■■□□□ 1.07
DNMT1-216ENST00000588952 ARL5CA6NH57 179 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 CITO14578 2027 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 PTGESO14684 152 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 PSMC2P35998 433 aaKnown RBP21.76■■□□□ 1.07
DNMT1-216ENST00000588952 SPAG1Q07617 926 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 HSP90AA4PQ58FG1 418 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 LUZP1Q86V48 1076 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 GAS2L3Q86XJ1 694 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 FAM212AQ96EL1 285 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 RNPC3Q96LT9 517 aaKnown RBP21.76■■□□□ 1.07
DNMT1-216ENST00000588952 ZMAT2Q96NC0 199 aaKnown RBP21.76■■□□□ 1.07
DNMT1-216ENST00000588952 CASD1Q96PB1 797 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 MKNK1Q9BUB5 465 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 PDE11AQ9HCR9 933 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 FANCLQ9NW38 375 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 CNTN3Q9P232 1028 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 PLAGL2Q9UPG8 496 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 INPP5FQ9Y2H2 1132 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 SLC4A7Q9Y6M7 1214 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 PTPRJQ12913 1337 aa21.76■■□□□ 1.07
DNMT1-216ENST00000588952 IKBKBO14920 756 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 MAPK13O15264 365 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 INPPL1O15357 1258 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 DGKIO75912 1065 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 EPB41P11171 864 aaKnown RBP21.75■■□□□ 1.07
DNMT1-216ENST00000588952 SCNN1GP51170 649 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 YARSP54577 528 aaKnown RBP21.75■■□□□ 1.07
DNMT1-216ENST00000588952 PSMD6Q15008 389 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 TPD52L1Q16890 204 aaPredicted RBP21.75■■□□□ 1.07
DNMT1-216ENST00000588952 GLRA4Q5JXX5 417 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 C1orf220Q5T0J3 134 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 FAM109BQ6ICB4 259 aaPredicted RBP21.75■■□□□ 1.07
DNMT1-216ENST00000588952 EFCAB13Q8IY85 973 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 FAM200AQ8TCP9 573 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 PRO3102Q9H379 93 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 THAP9Q9H5L6 903 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 RC3H2Q9HBD1 1191 aaKnown RBP21.75■■□□□ 1.07
DNMT1-216ENST00000588952 TRIP11Q15643 1979 aa21.75■■□□□ 1.07
DNMT1-216ENST00000588952 NFICP08651 508 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 ATP2A2P16615 1042 aaKnown RBP21.74■■□□□ 1.07
DNMT1-216ENST00000588952 BMP8BP34820 402 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 DLG4P78352 724 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 POU5F1Q01860 360 aaKnown RBP21.74■■□□□ 1.07
DNMT1-216ENST00000588952 PPP2R3AQ06190 1150 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 CDKAL1Q5VV42 579 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 LMBRD2Q68DH5 695 aaPredicted RBP21.74■■□□□ 1.07
DNMT1-216ENST00000588952 JADE1Q6IE81 842 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 GLB1LQ6UWU2 654 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 HERC6Q8IVU3 1022 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 CCDC127Q96BQ5 260 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 CNOT6LQ96LI5 555 aaKnown RBP21.74■■□□□ 1.07
DNMT1-216ENST00000588952 SLC9A7Q96T83 725 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 POP1Q99575 1024 aaKnown RBP21.74■■□□□ 1.07
DNMT1-216ENST00000588952 MTIF3Q9H2K0 278 aaKnown RBP21.74■■□□□ 1.07
DNMT1-216ENST00000588952 PLEKHA5Q9HAU0 1116 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 UBN1Q9NPG3 1134 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 TOPORSQ9NS56 1045 aaPredicted RBP21.74■■□□□ 1.07
DNMT1-216ENST00000588952 HCSTQ9UBK5 93 aa21.74■■□□□ 1.07
DNMT1-216ENST00000588952 PDCD11Q14690 1871 aaKnown RBP21.74■■□□□ 1.07
DNMT1-216ENST00000588952 FNDC1Q4ZHG4 1894 aaPredicted RBP21.74■■□□□ 1.07
DNMT1-216ENST00000588952 SMIM28A0A1B0GU29 152 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 LRRIQ3A6PVS8 624 aaPredicted RBP21.73■■□□□ 1.07
DNMT1-216ENST00000588952 TBKBP1A7MCY6 615 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 TULP1O00294 542 aaPredicted RBP21.73■■□□□ 1.07
DNMT1-216ENST00000588952 B4GALT3O60512 393 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 IL18RAPO95256 599 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 GJB5O95377 273 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 POMCP01189 267 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 KCNE1P15382 129 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 NAB2Q15742 525 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 PAN2Q504Q3 1202 aaKnown RBP21.73■■□□□ 1.07
DNMT1-216ENST00000588952 NOMO2Q5JPE7 1267 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 CHRDL2Q6WN34 429 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 PARD3BQ8TEW8 1205 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 ZNF689Q96CS4 500 aaPredicted RBP21.73■■□□□ 1.07
DNMT1-216ENST00000588952 TMEM117Q9H0C3 514 aa21.73■■□□□ 1.07
DNMT1-216ENST00000588952 GRXCR1A8MXD5 290 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 FGFR1OPO95684 399 aaKnown RBP21.72■■□□□ 1.07
DNMT1-216ENST00000588952 CAVIN2O95810 425 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 TRIM49P0CI25 452 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 TRIM49CP0CI26 452 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 ZNF18P17022 549 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 MARSP56192 900 aaKnown RBP21.72■■□□□ 1.07
DNMT1-216ENST00000588952 MCCD1P59942 119 aaPredicted RBP21.72■■□□□ 1.07
DNMT1-216ENST00000588952 BFSP1Q12934 665 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 CCDC40Q4G0X9 1142 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 FRMD5Q7Z6J6 570 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 RNF214Q8ND24 703 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 PHOSPHO2Q8TCD6 241 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 C18orf25Q96B23 403 aaPredicted RBP21.72■■□□□ 1.07
DNMT1-216ENST00000588952 PPP1R10Q96QC0 940 aaKnown RBP21.72■■□□□ 1.07
DNMT1-216ENST00000588952 RPS6KC1Q96S38 1066 aa21.72■■□□□ 1.07
DNMT1-216ENST00000588952 HOXA2O43364 376 aa21.71■■□□□ 1.07
DNMT1-216ENST00000588952 DLATP10515 647 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms