RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 INPPL1O15357 1258 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 CXCL8P10145 99 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 ACRP10323 421 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 ATF7P17544 494 aaPredicted RBP18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 GTF2H1P32780 548 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 TNFSF9P41273 254 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 VAMP7P51809 220 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 WDR5P61964 334 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 TMEM240Q5SV17 173 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 ZNF365Q70YC5 407 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 WDR49Q8IV35 697 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 ABI1Q8IZP0 508 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 URGCPQ8TCY9 931 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 EEF2KMTQ96G04 330 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 SAMSN1Q9NSI8 373 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 SLC38A7Q9NVC3 462 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 KANSL3Q9P2N6 904 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 HES2Q9Y543 173 aa18.41■□□□□ 0.54
SCAMP4-211ENST00000588907 N4BP1O75113 896 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 KCNE1P15382 129 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 MTIF2P46199 727 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 CLDN10P78369 228 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 SLC10A6Q3KNW5 377 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 XKR4Q5GH76 650 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 ZBTB41Q5SVQ8 909 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 ALKAL1Q6UXT8 129 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 TRIM59Q8IWR1 403 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 RNF169Q8NCN4 708 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 RNF214Q8ND24 703 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 PHOSPHO2Q8TCD6 241 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 PARD3BQ8TEW8 1205 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 CACTINQ8WUQ7 758 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 BORCS6Q96GS4 357 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 SLC9A7Q96T83 725 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 APOL6Q9BWW8 343 aa18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 MRPL9Q9BYD2 267 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.4■□□□□ 0.54
SCAMP4-211ENST00000588907 ZBBXA8MT70 800 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 AKAP5P24588 427 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 MAGEA10P43363 369 aaPredicted RBP18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 MAN2A1Q16706 1144 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 TCTN1Q2MV58 587 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 UVSSAQ2YD98 709 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 SEZ6Q53EL9 994 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 AGMOQ6ZNB7 445 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 C16orf59Q7L2K0 433 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 OTOP2Q7RTS6 562 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 IRF2BP1Q8IU81 584 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 CRIPAKQ8N1N5 446 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 TOP1MTQ969P6 601 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 CGRRF1Q99675 332 aa18.39■□□□□ 0.53
SCAMP4-211ENST00000588907 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.39■□□□□ 0.531e-8■□□□□ 8.6
SCAMP4-211ENST00000588907 CARNS1A5YM72 827 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 ARL5CA6NH57 179 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 LRRC10BA6NIK2 292 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 LACTBL1A8MY62 500 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 TPM3P06753 285 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 DLATP10515 647 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 TNNI1P19237 187 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 CETN1Q12798 172 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 GRIK3Q13003 919 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 TMEM132DQ14C87 1099 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 DUOXA2Q1HG44 320 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 FILIP1LQ4L180 1135 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 DCAF17Q5H9S7 520 aaPredicted RBP18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 TCERG1LQ5VWI1 586 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 CREBRFQ8IUR6 639 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 TMEM192Q8IY95 271 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 ZSWIM2Q8NEG5 633 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 CCDC127Q96BQ5 260 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 FAM212AQ96EL1 285 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 ANKRD36BP1Q96IX9 119 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 TUBGCP2Q9BSJ2 902 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 TMEM117Q9H0C3 514 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 HSD3B7Q9H2F3 369 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 PDE11AQ9HCR9 933 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 LIMA1Q9UHB6 759 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 UBQLN1Q9UMX0 589 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 SLC4A7Q9Y6M7 1214 aa18.38■□□□□ 0.53
SCAMP4-211ENST00000588907 ANK1P16157 1881 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 PMM2O15305 246 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 P4HA2O15460 535 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 TNNC2P02585 160 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 CYP3A5P20815 502 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 MLH1P40692 756 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 GAS2L3Q86XJ1 694 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 LPPQ93052 612 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 SLC35C1Q96A29 364 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 KIF12Q96FN5 646 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 GAD1Q99259 594 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 RBSNQ9H1K0 784 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 RNF39Q9H2S5 420 aa18.37■□□□□ 0.53
SCAMP4-211ENST00000588907 LRRIQ3A6PVS8 624 aaPredicted RBP18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 OFD1O75665 1012 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 AFPP02771 609 aaKnown RBP18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 THP07101 528 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 TMEM191BP0C7N4 346 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 EPHB4P54760 987 aa18.36■□□□□ 0.53
SCAMP4-211ENST00000588907 PDCD11Q14690 1871 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms